myRT

myRT report for GCA_000735675.1_ASM73567v1

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Seq: KL662207.1 Sphingobium yanoikuyae strain B1 genomic scaffold scaffold15, whole genome shotgun sequence (137944 bp)
Overview 1 RT 1: 89642-97108 bp Neighborhood of RT #1 [89642, 97113] PinE Zn_ribbon_recom Recombinase RVT-GII GIIM RpoE FecR Feature: gene Location: 89642-89968 bp Feature: gene Location: 90544-92625 bp Feature: domain Description: PinE Location: 90604-91282 bp Feature: domain Description: PinE Location: 90604-91 282 bp Feature: domain Description: Zn_ribbon_recom Location: 91552-91708 bp Feature: domain Description: Zn_ribbon_recom Location: 91 552-91 708 bp Feature: domain Description: Recombinase Location: 92233-92356 bp Feature: domain Description: Recombinase Location: 92233-92356 bp Feature: gene Location: 93498-95024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93804-94521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93804-94521 bp Feature: domain Description: GIIM Note: maturase Location: 94599-94824 bp Feature: domain Description: GIIM Note: maturase Location: 94599-94824 bp Feature: gene Location: 95523-96038 bp Feature: domain Description: RpoE Location: 95541-96024 bp Feature: domain Description: RpoE Location: 95541 -96024 bp Feature: gene Location: 96151-97113 bp Feature: domain Description: FecR Location: 96163-97108 bp Feature: domain Description: FecR Location: 961 63-971 08 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), Zn_ribbon_recom (pfam13408), Recombinase (pfam07508), RVT-GII, GIIM (pfam08388), RpoE (COG3343), FecR (pfam04773)