myRT

myRT report for GCA_000736575.1_XBJ2_3531_PRJEB4326

Download annotations/find similar RTs

Seq: HG428410.1 Xenorhabdus bovienii str. Jollieti genomic scaffold, XBJ2_3531_scaffold229, whole genome shotgun sequence (32193 bp)
Overview 1 RT 1: 26161-29832 bp Neighborhood of RT #1 [26161, 29849] RVT-GII GIIM RVT_N Antirestrict Feature: gene Location: 26161-26661 bp Feature: gene Location: 26881-27006 bp Feature: gene Location: 26942-28036 bp Ori: CDH29476.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26945-27527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26945-27527 bp Feature: domain Description: GIIM Note: maturase Location: 27587-27812 bp Feature: domain Description: GIIM Note: maturase Location: 27587-2781 2 bp Feature: gene Location: 28101-28415 bp Ori: CDH29477.1 Feature: domain Description: RVT_N Location: 28149-28392 bp Feature: domain Description: RVT_N Location: 281 49-28392 bp Feature: gene Location: 29415-29849 bp Ori: CDH29478.1 Feature: domain Description: Antirestrict Location: 29565-29832 bp Feature: domain Description: Antirestrict Location: 29565-29832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RVT_N (pfam13655), Antirestrict (pfam03230)

Seq: HG428224.1 Xenorhabdus bovienii str. Jollieti genomic scaffold, XBJ2_3531_scaffold43, whole genome shotgun sequence (41713 bp)
Overview 1 RT 1: 24164-29880 bp Neighborhood of RT #1 [24164, 29948] COG4733 SLATT_5 RVT-UG17 PIN_VapC4-5_FitB-like PhdYeFM_antitox Feature: gene Location: 24164-26803 bp Ori: CDH30115.1 Feature: domain Description: COG4733 Location: 24188-26798 bp Feature: domain Description: COG4733 Location: 2 4188-2 6798 bp Feature: gene Location: 27158-27703 bp Ori: CDH30116.1 Feature: domain Description: SLATT_5 Location: 27164-27674 bp Feature: domain Description: SLATT_5 Location: 2 7164-2 7674 bp Feature: gene Location: 27681-29051 bp Ori: CDH30117.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 27909-28515 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 7909-2 8515 bp Feature: gene Location: 29269-29694 bp Ori: CDH30118.1 Feature: domain Description: PIN_VapC4-5_FitB-like Location: 29281-29680 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 2 92 81-2 9680 bp Feature: gene Location: 29694-29948 bp Ori: CDH30119.1 Feature: domain Description: PhdYeFM_antitox Location: 29709-29880 bp Feature: domain Description: PhdYeFM_antitox Location: 2 9709-2 9880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4733 (Phage-related protein, tail component ), SLATT_5 (pfam18160), RVT-UG17, PIN_VapC4-5_FitB-like (cd18754), PhdYeFM_antitox (pfam02604)