myRT

myRT report for GCA_000736925.1_GFC_12

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Seq: JIDM01000001.1 Vibrio cholerae strain 981-75 DA89.contig00001, whole genome shotgun sequence (344575 bp)
Overview 1 RT 1: 123401-128636 bp Neighborhood of RT #1 [123401, 128662] TIGR02646 COG3950 RVT-Retrons PRK10621 LysR Feature: gene Location: 123401-124018 bp Ori: KFE21569.1 Feature: domain Description: TIGR02646 Location: 123512-123896 bp Feature: domain Description: TIGR02646 Location: 1 2351 2-1 23896 bp Feature: gene Location: 124031-125653 bp Ori: KFE21456.1 Feature: domain Description: COG3950 Location: 124217-125648 bp Feature: domain Description: COG3950 Location: 1 2421 7-1 25648 bp Feature: gene Location: 125654-126601 bp Ori: KFE21400.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125768-126365 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 25768-1 26365 bp Feature: gene Location: 127087-127872 bp Ori: KFE21454.1 Feature: domain Description: PRK10621 Location: 127096-127867 bp Feature: domain Description: PRK1 0621 Location: 1 27096-1 27867 bp Feature: gene Location: 127802-128662 bp Ori: KFE21587.1 Feature: domain Description: LysR Location: 127808-128636 bp Feature: domain Description: LysR Location: 1 27808-1 28636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10621 (hypothetical protein; Provisional), LysR (COG0583)

Seq: JIDM01000049.1 Vibrio cholerae strain 981-75 DA89.contig00049, whole genome shotgun sequence (5681 bp)
Overview 1 RT 1: 128-3213 bp Neighborhood of RT #1 [128, 3213] RVT-UG14 Feature: gene Location: 128-1693 bp Ori: KFE18155.1 Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 563-1040 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 563-1040 bp Feature: gene Location: 1829-2389 bp Feature: gene Location: 2593-3213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG14