myRT

myRT report for GCA_000737335.3_ASM73733v3

Download annotations/find similar RTs

Seq: JMCC02000002.1 Enhygromyxa salina strain DSM 15201 ES-Contig_2, whole genome shotgun sequence (180689 bp)
Overview 1 RT 1: 110575-123036 bp Neighborhood of RT #1 [110575, 123041] 7WD40 HEAT_2 HEAT HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 RVT-Retrons PRK05326 COG4585 Feature: gene Location: 110575-117204 bp Ori: KIG19442.1 Feature: domain Description: 7WD40 Location: 110623-111187 bp Feature: domain Description: 7WD40 Location: 1 1 0623-1 1 1 1 87 bp Feature: domain Description: HEAT_2 Location: 111568-111712 bp Feature: domain Description: HEAT_2 Location: 1 1 1 568-1 1 1 71 2 bp Feature: domain Description: HEAT Location: 111739-111811 bp Feature: domain Description: HEAT Location: 1 1 1 739-1 1 1 81 1 bp Feature: domain Description: HEAT_2 Location: 111937-112192 bp Feature: domain Description: HEAT_2 Location: 1 1 1 937-1 1 21 92 bp Feature: domain Description: HEAT_2 Location: 112327-112594 bp Feature: domain Description: HEAT_2 Location: 1 1 2327-1 1 2594 bp Feature: domain Description: HEAT_2 Location: 112765-113011 bp Feature: domain Description: HEAT_2 Location: 1 1 2765-1 1 301 1 bp Feature: domain Description: HEAT_2 Location: 113074-113230 bp Feature: domain Description: HEAT_2 Location: 1 1 3074-1 1 3230 bp Feature: domain Description: HEAT_2 Location: 113257-113518 bp Feature: domain Description: HEAT_2 Location: 1 1 3257-1 1 351 8 bp Feature: domain Description: HEAT_2 Location: 113551-113770 bp Feature: domain Description: HEAT_2 Location: 1 1 3551 -1 1 3770 bp Feature: domain Description: HEAT_2 Location: 114421-114661 bp Feature: domain Description: HEAT_2 Location: 1 1 4421 -1 1 4661 bp Feature: domain Description: HEAT_2 Location: 114730-114967 bp Feature: domain Description: HEAT_2 Location: 1 1 4730-1 1 4967 bp Feature: domain Description: HEAT_2 Location: 115165-115330 bp Feature: domain Description: HEAT_2 Location: 1 1 51 65-1 1 5330 bp Feature: domain Description: HEAT_2 Location: 115420-115654 bp Feature: domain Description: HEAT_2 Location: 1 1 5420-1 1 5654 bp Feature: domain Description: HEAT_2 Location: 115660-115822 bp Feature: domain Description: HEAT_2 Location: 1 1 5660-1 1 5822 bp Feature: domain Description: HEAT_2 Location: 116053-116233 bp Feature: domain Description: HEAT_2 Location: 1 1 6053-1 1 6233 bp Feature: domain Description: HEAT_2 Location: 116686-116872 bp Feature: domain Description: HEAT_2 Location: 1 1 6686-1 1 6872 bp Feature: domain Description: HEAT_2 Location: 117013-117148 bp Feature: domain Description: HEAT_2 Location: 1 1 701 3-1 1 71 48 bp Feature: gene Location: 117201-119099 bp Feature: gene Location: 119102-120433 bp Ori: KIG19444.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 119579-120206 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 9579-1 20206 bp Feature: gene Location: 121140-122819 bp Ori: KIG19445.1 Feature: domain Description: PRK05326 Location: 121146-122679 bp Feature: domain Description: PRK05326 Location: 1 21 1 46-1 22679 bp Feature: gene Location: 122904-123041 bp Ori: KIG19446.1 Feature: domain Description: COG4585 Location: 122952-123036 bp Feature: domain Description: COG4585 Location: 1 22952-1 23036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 7WD40 (sd00039), HEAT_2 (pfam13646), HEAT (sd00044), RVT-Retrons, PRK05326 (potassium/proton antiporter), COG4585 (Signal transduction histidine kinase )

Seq: JMCC02000056.1 Enhygromyxa salina strain DSM 15201 ES-Contig_56, whole genome shotgun sequence (58372 bp)
Overview 1 RT 1: 25010-33032 bp Neighborhood of RT #1 [25010, 33142] STKc_PknB_like RVT-UG28b Rotamase_2 Feature: gene Location: 25010-25879 bp Feature: gene Location: 26028-27038 bp Ori: KIG15353.1 Feature: domain Description: STKc_PknB_like Location: 26199-27018 bp Feature: domain Description: STKc_PknB_like Location: 2 6199-2 7018 bp Feature: gene Location: 28310-30094 bp Ori: KIG15354.1 Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 28739-29480 bp Feature: RT Description: RVT-UG2 8b Note: UG2 8b RT Location: 2 8739-2 9480 bp Feature: gene Location: 30825-32228 bp Feature: gene Location: 32318-33142 bp Ori: KIG15356.1 Feature: domain Description: Rotamase_2 Location: 32660-33032 bp Feature: domain Description: Rotamase_2 Location: 32 660-33032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-UG28b, Rotamase_2 (pfam13145)

Seq: JMCC02000106.1 Enhygromyxa salina strain DSM 15201 ES-Contig_106, whole genome shotgun sequence (43706 bp)
Overview 1 RT 1: 32856-36968 bp Neighborhood of RT #1 [32856, 36968] RVT-GII GIIM Feature: gene Location: 32856-33041 bp Feature: gene Location: 33264-33824 bp Feature: gene Location: 34862-35839 bp Ori: KIG13150.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34865-35441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 4865-3 5441 bp Feature: domain Description: GIIM Note: maturase Location: 35531-35747 bp Feature: domain Description: GIIM Note: maturase Location: 3 553 1-3 5747 bp Feature: gene Location: 35986-36360 bp Feature: gene Location: 36603-36968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JMCC02000150.1 Enhygromyxa salina strain DSM 15201 ES-Contig_150, whole genome shotgun sequence (16186 bp)
Overview 1 RT 1: 93-5535 bp Neighborhood of RT #1 [93, 5675] Aldo_ket_red RimL HEAT_2 RVT-Retrons MSCRAMM_SdrC rpt_mate_G_obs LRR_RI Feature: gene Location: 93-1502 bp Ori: KIG12105.1 Feature: domain Description: Aldo_ket_red Location: 792-1314 bp Feature: domain Description: Aldo_ket_red Location: 792-1314 bp Feature: gene Location: 1509-2102 bp Ori: KIG12106.1 Feature: domain Description: RimL Location: 1569-2091 bp Feature: domain Description: RimL Location: 1569-2091 bp Feature: gene Location: 2347-3795 bp Ori: KIG12107.1 Feature: domain Description: HEAT_2 Location: 2515-2680 bp Feature: domain Description: HEAT_2 Location: 2515-2680 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2935-3559 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2935-3559 bp Feature: gene Location: 3820-4584 bp Ori: KIG12108.1 Feature: domain Description: MSCRAMM_SdrC Location: 4045-4438 bp Feature: domain Description: MSCRAMM_SdrC Location: 4 04 5-4 4 38 bp Feature: gene Location: 4749-5675 bp Ori: KIG12109.1 Feature: domain Description: rpt_mate_G_obs Location: 4776-4875 bp Feature: domain Description: rpt_mate_G_obs Location: 4 776-4 875 bp Feature: domain Description: LRR_RI Location: 5244-5535 bp Feature: domain Description: LRR_RI Location: 524 4 -5535 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Aldo_ket_red (pfam00248), RimL (COG1670), HEAT_2 (pfam13646), RVT-Retrons, MSCRAMM_SdrC (NF000535), rpt_mate_G_obs (TIGR02996), LRR_RI (smart00368)

Seq: JMCC02000029.1 Enhygromyxa salina strain DSM 15201 ES-Contig_29, whole genome shotgun sequence (244271 bp)
Overview 1 RT 1: 239750-244156 bp Neighborhood of RT #1 [239750, 244194] myxo_disulf_rpt RCC1_2 RCC1_2 RCC1_2 RCC1_2 RCC1_2 RCC1_2 RCC1_2 myxo_disulf_rpt RCC1_2 RCC1_2 RCC1_2 RCC1_2 RCC1_2 RCC1_2 RCC1_2 RVT-UNC TrmK Feature: gene Location: 239750-241351 bp Ori: KIG17189.1 Feature: domain Description: myxo_disulf_rpt Location: 240089-240176 bp Feature: domain Description: myxo_disulf_rpt Location: 240089-240176 bp Feature: domain Description: RCC1_2 Location: 240203-240275 bp Feature: domain Description: RCC1_2 Location: 240203-240275 bp Feature: domain Description: RCC1_2 Location: 240383-240428 bp Feature: domain Description: RCC1_2 Location: 240383-240428 bp Feature: domain Description: RCC1_2 Location: 240527-240602 bp Feature: domain Description: RCC1_2 Location: 2405 27-240602 bp Feature: domain Description: RCC1_2 Location: 240698-240776 bp Feature: domain Description: RCC1_2 Location: 240698-240776 bp Feature: domain Description: RCC1_2 Location: 240857-240941 bp Feature: domain Description: RCC1_2 Location: 24085 7-240941 bp Feature: domain Description: RCC1_2 Location: 241025-241109 bp Feature: domain Description: RCC1_2 Location: 241025 -241109 bp Feature: domain Description: RCC1_2 Location: 241193-241262 bp Feature: domain Description: RCC1_2 Location: 241193-241262 bp Feature: gene Location: 241348-242970 bp Ori: KIG17190.1 Feature: domain Description: myxo_disulf_rpt Location: 241693-241777 bp Feature: domain Description: myxo_disulf_rpt Location: 241693-241777 bp Feature: domain Description: RCC1_2 Location: 241789-241876 bp Feature: domain Description: RCC1_2 Location: 241789-241876 bp Feature: domain Description: RCC1_2 Location: 241963-242041 bp Feature: domain Description: RCC1_2 Location: 241963-242041 bp Feature: domain Description: RCC1_2 Location: 242125-242209 bp Feature: domain Description: RCC1_2 Location: 242125 -242209 bp Feature: domain Description: RCC1_2 Location: 242311-242380 bp Feature: domain Description: RCC1_2 Location: 242311-242380 bp Feature: domain Description: RCC1_2 Location: 242464-242560 bp Feature: domain Description: RCC1_2 Location: 242464-2425 60 bp Feature: domain Description: RCC1_2 Location: 242638-242725 bp Feature: domain Description: RCC1_2 Location: 242638-242725 bp Feature: domain Description: RCC1_2 Location: 242806-242893 bp Feature: domain Description: RCC1_2 Location: 242806-242893 bp Feature: gene Location: 243147-243275 bp Ori: KIG17191.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 243186-243243 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 243186-243243 bp Feature: gene Location: 243502-244194 bp Ori: KIG17192.1 Feature: domain Description: TrmK Location: 243511-244156 bp Feature: domain Description: TrmK Location: 2435 11-24415 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT myxo_disulf_rpt (TIGR02232), RCC1_2 (pfam13540), RVT-G2Lc/RVT-CRISPR/RVT-GII(RVT-UNC), TrmK (pfam04816)