myRT

myRT report for GCA_000739895.2_ASM73989v2

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Seq: BBJS01000043.1 Sphingomonas paucimobilis NBRC 13935 DNA, contig: SP643, whole genome shotgun sequence (272145 bp)
Overview 1 RT 1: 111606-115944 bp Neighborhood of RT #1 [111606, 116003] RVT-GII Intron_maturas2 ArdC Feature: gene Location: 111606-111806 bp Feature: gene Location: 111847-112212 bp Feature: gene Location: 112209-114131 bp Ori: GAN14627.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112476-113313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 2476-1 1 331 3 bp Feature: domain Description: Intron_maturas2 Location: 113445-113685 bp Feature: domain Description: Intron_maturas2 Location: 1 1 3445-1 1 3685 bp Feature: gene Location: 114723-115010 bp Feature: gene Location: 115050-116003 bp Ori: GAN14629.1 Feature: domain Description: ArdC Location: 115068-115944 bp Feature: domain Description: ArdC Location: 1 1 5068-1 1 5944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), ArdC (COG4227)

Seq: BBJS01000055.1 Sphingomonas paucimobilis NBRC 13935 DNA, contig: SP655, whole genome shotgun sequence (87042 bp)
Overview 1 RT 1: 18255-26803 bp Neighborhood of RT #1 [18255, 26817] PRK01663 HTH_1 PBP2_LTTR_like_4 RVT-UG9 PRK14975 PRK14716 Feature: gene Location: 18255-19502 bp Ori: GAN15302.1 Feature: domain Description: PRK01663 Location: 18261-19458 bp Feature: domain Description: PRK01663 Location: 182 61-19458 bp Feature: gene Location: 19464-20366 bp Ori: GAN15303.1 Feature: domain Description: HTH_1 Location: 19494-19665 bp Feature: domain Description: HTH_1 Location: 19494-19665 bp Feature: domain Description: PBP2_LTTR_like_4 Location: 19755-20343 bp Feature: domain Description: PBP2 _LTTR_like_4 Location: 19755-2 0343 bp Feature: gene Location: 21609-23291 bp Ori: GAN15304.1 Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 21858-22494 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 2 1858-2 2 494 bp Feature: gene Location: 23288-24832 bp Ori: GAN15305.1 Feature: domain Description: PRK14975 Location: 23678-24773 bp Feature: domain Description: PRK14975 Location: 2 3678-2 4773 bp Feature: gene Location: 26362-26817 bp Ori: GAN15306.1 Feature: domain Description: PRK14716 Location: 26365-26803 bp Feature: domain Description: PRK14716 Location: 2 6365-2 6803 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK01663 (C4-dicarboxylate transporter DctA; Reviewed), HTH_1 (pfam00126), PBP2_LTTR_like_4 (cd08440), RVT-UG9, PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional), PRK14716 (glycosyl transferase family protein)