myRT

myRT report for GCA_000740615.1_ASM74061v1

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Seq: JNOJ01000061.1 (25662 bp)
Overview 1 RT 1: 14409-22102 bp Neighborhood of RT #1 [14409, 22107] PFLE_PFLC RVT-GII RVT-GII GIIM YesM PRK12459 Feature: gene Location: 14409-15326 bp Ori: KFH93689.1 Feature: domain Description: PFLE_PFLC Location: 14445-15300 bp Feature: domain Description: PFLE_PFLC Location: 1 4445-1 5300 bp Feature: gene Location: 15463-16368 bp Feature: gene Location: 16854-17393 bp Ori: KFH93691.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17184-17262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 71 84-1 7262 bp Feature: gene Location: 17460-17942 bp Ori: KFH93692.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17469-17709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7469-1 7709 bp Feature: domain Description: GIIM Note: maturase Location: 17757-17937 bp Feature: domain Description: GIIM Note: maturase Location: 1 7757-1 7937 bp Feature: gene Location: 18525-19754 bp Ori: KFH93693.1 Feature: domain Description: YesM Location: 19005-19749 bp Feature: domain Description: YesM Location: 1 9005-1 9749 bp Feature: gene Location: 20956-22107 bp Ori: KFH93694.1 Feature: domain Description: PRK12459 Location: 20962-22102 bp Feature: domain Description: PRK1 2459 Location: 20962-221 02 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PFLE_PFLC (TIGR02494), RVT-GII, GIIM (pfam08388), YesM (COG2972), PRK12459 (S-adenosylmethionine synthetase; Provisional)

Seq: JNOJ01000201.1 (2031 bp)
Overview 1 RT 1: 1-1644 bp Neighborhood of RT #1 [1, 1889] PHA02517 RVT-GII GIIM Feature: gene Location: 1-264 bp Ori: KFH88200.1 Feature: domain Description: PHA02517 Location: 4-265 bp Feature: domain Description: PHA02 517 Location: 4-2 65 bp Feature: gene Location: 381-1889 bp Ori: KFH88201.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 639-1371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 639-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1446-1644 bp Feature: domain Description: GIIM Note: maturase Location: 1446-1644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNOJ01000300.1 (818 bp)
Overview 1 RT 1: 1-337 bp Neighborhood of RT #1 [1, 341] RVT-GII Feature: gene Location: 1-341 bp Ori: KFH87630.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268-337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268-3 3 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JNOJ01000154.1 (4436 bp)
Overview 1 RT 1: 2500-3628 bp Neighborhood of RT #1 [2500, 3786] PRK10173 PRK10173 RVT-GII Feature: gene Location: 2500-2949 bp Ori: KFH89115.1 Feature: domain Description: PRK10173 Location: 2503-2941 bp Feature: domain Description: PRK10173 Location: 2503-294 1 bp Feature: gene Location: 2924-3244 bp Ori: KFH89116.1 Feature: domain Description: PRK10173 Location: 2927-3155 bp Feature: domain Description: PRK10173 Location: 2927-3155 bp Feature: gene Location: 3283-3786 bp Ori: KFH89117.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3556-3628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3556-3628 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII

Seq: JNOJ01000025.1 (60240 bp)
Overview 1 RT 1: 35293-42695 bp Neighborhood of RT #1 [35293, 42712] Q FRG RVT-Retrons Phage_GPA DUF5405 Feature: gene Location: 35293-36327 bp Ori: KFH95123.1 Feature: domain Description: Q Location: 35296-36319 bp Feature: domain Description: Q Location: 35 296-36319 bp Feature: gene Location: 36840-38204 bp Ori: KFH95124.1 Feature: domain Description: FRG Location: 37407-37692 bp Feature: domain Description: FRG Location: 37407-37692 bp Feature: gene Location: 38313-39263 bp Ori: KFH95125.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38493-39036 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38493-39036 bp Feature: gene Location: 40159-42447 bp Ori: KFH95126.1 Feature: domain Description: Phage_GPA Location: 40558-41545 bp Feature: domain Description: Phage_GPA Location: 405 5 8-415 45 bp Feature: gene Location: 42437-42712 bp Ori: KFH95127.1 Feature: domain Description: DUF5405 Location: 42455-42695 bp Feature: domain Description: DUF5 405 Location: 4245 5 -42695 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), FRG (smart00901), RVT-Retrons, Phage_GPA (pfam05840), DUF5405 (pfam17399)