myRT

myRT report for GCA_000742135.1_ASM74213v1

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Seq: KN046818.1 Klebsiella pneumoniae strain ATCC 13883 genomic scaffold scaffold1, whole genome shotgun sequence (5284261 bp)
Overview 1 RT 1: 3380884-3389919 bp Neighborhood of RT #1 [3380884, 3389924] DDE_Tnp_IS1 FimD RVT-UG4 PRK09692 YqgA Feature: gene Location: 3380884-3381177 bp Ori: KFJ76064.1 Feature: domain Description: DDE_Tnp_IS1 Location: 3380887-3381175 bp Feature: domain Description: DDE_Tnp_IS1 Location: 3380887-3381 1 75 bp Feature: gene Location: 3382263-3384857 bp Ori: KFJ76011.1 Feature: domain Description: FimD Location: 3382305-3384846 bp Feature: domain Description: FimD Location: 3382305-3384846 bp Feature: gene Location: 3384857-3386935 bp Ori: KFJ75570.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3385265-3385709 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3385265-3385709 bp Feature: gene Location: 3387693-3388556 bp Ori: KFJ75999.1 Feature: domain Description: PRK09692 Location: 3387717-3388554 bp Feature: domain Description: PRK09692 Location: 338771 7-3388554 bp Feature: gene Location: 3389211-3389924 bp Ori: KFJ75909.1 Feature: domain Description: YqgA Location: 3389217-3389919 bp Feature: domain Description: YqgA Location: 338921 7-338991 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), FimD (COG3188), RVT-UG4, PRK09692 (Integrase; provisional), YqgA (COG1811)