myRT

myRT report for GCA_000742435.1_ASM74243v1

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Seq: JQAM01000015.1 Wolbachia pipientis strain wRec s22, whole genome shotgun sequence (34344 bp)
Overview 1 RT 1: 25013-30789 bp Neighborhood of RT #1 [25013, 30789] MiaB-like-C gatA RVT-GII Feature: gene Location: 25013-26239 bp Feature: domain Description: MiaB-like-C Location: 25028-26192 bp Feature: domain Description: MiaB-like-C Location: 25028-261 92 bp Feature: gene Location: 26629-28098 bp Feature: domain Description: gatA Location: 26677-28063 bp Feature: domain Description: gatA Location: 26677-28063 bp Feature: gene Location: 28460-29773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28715-29405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2871 5-29405 bp Feature: gene Location: 29944-30147 bp Feature: gene Location: 30247-30789 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MiaB-like-C (TIGR01579), gatA (TIGR00132), RVT-GII

Seq: JQAM01000025.1 Wolbachia pipientis strain wRec s31, whole genome shotgun sequence (23411 bp)
Overview 1 RT 1: 19758-23233 bp Neighborhood of RT #1 [19758, 23233] PDDEXK_2 RVT_N RVT-GII RVT-GII GIIM HNHc T_den_put_tspse Feature: gene Location: 19758-20165 bp Feature: domain Description: PDDEXK_2 Location: 19836-20151 bp Feature: domain Description: PDDEXK_2 Location: 19836-2 0151 bp Feature: gene Location: 20201-20332 bp Feature: gene Location: 20586-21335 bp Feature: domain Description: RVT_N Location: 20697-20943 bp Feature: domain Description: RVT_N Location: 2 0697-2 0943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20985-21297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0985-2 12 97 bp Feature: gene Location: 21296-22333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21356-21671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1356-2 1671 bp Feature: domain Description: GIIM Note: maturase Location: 21764-21980 bp Feature: domain Description: GIIM Note: maturase Location: 2 1764-2 1980 bp Feature: domain Description: HNHc Note: nucleases Location: 22178-22319 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 178-2 2 319 bp Feature: gene Location: 22360-22740 bp Feature: domain Description: T_den_put_tspse Location: 22435-22720 bp Feature: domain Description: T_den_put_tspse Location: 2 2 435-2 2 72 0 bp Feature: gene Location: 22955-23233 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), T_den_put_tspse (TIGR01784)

Seq: JQAM01000029.1 Wolbachia pipientis strain wRec s35, whole genome shotgun sequence (89056 bp)
Overview 1 RT 1: 13133-16516 bp 2 RT 2: 42436-46925 bp Neighborhood of RT #1 [13133, 16516] RVT-GII pcrA Neighborhood of RT #2 [42436, 46927] PDDEXK_2 RVT_N RVT-GII GIIM T_den_put_tspse PRK14012 Feature: gene Location: 13133-13267 bp Feature: gene Location: 13293-13514 bp Feature: gene Location: 13677-13820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13680-13815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 680-13 815 bp Feature: gene Location: 14044-15960 bp Feature: domain Description: pcrA Location: 14056-15940 bp Feature: domain Description: pcrA Location: 14056-15940 bp Feature: gene Location: 16187-16516 bp Feature: gene Location: 42436-42879 bp Feature: domain Description: PDDEXK_2 Location: 42463-42682 bp Feature: domain Description: PDDEXK_2 Location: 42463 -42682 bp Feature: gene Location: 43120-43263 bp Feature: gene Location: 43301-44848 bp Feature: domain Description: RVT_N Location: 43352-43589 bp Feature: domain Description: RVT_N Location: 43 3 52-43 589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43640-44291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 640-44291 bp Feature: domain Description: GIIM Note: maturase Location: 44342-44576 bp Feature: domain Description: GIIM Note: maturase Location: 443 42-44576 bp Feature: gene Location: 45142-45645 bp Feature: domain Description: T_den_put_tspse Location: 45190-45625 bp Feature: domain Description: T_den_put_tspse Location: 45190-45625 bp Feature: gene Location: 45680-46927 bp Feature: domain Description: PRK14012 Location: 45719-46925 bp Feature: domain Description: PRK14012 Location: 45719-46925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, pcrA (TIGR01073), PDDEXK_2 (pfam12784), RVT_N (pfam13655), GIIM (pfam08388), T_den_put_tspse (TIGR01784), PRK14012 (IscS subfamily cysteine desulfurase)

Seq: JQAM01000036.1 Wolbachia pipientis strain wRec s41, whole genome shotgun sequence (117192 bp)
Overview 1 RT 1: 1-1423 bp Neighborhood of RT #1 [1, 1620] RVT_N RVT-GII PDDEXK_2 Feature: gene Location: 1-738 bp Feature: domain Description: RVT_N Location: 52-241 bp Feature: domain Description: RVT_N Location: 52-24 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292-730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292-730 bp Feature: gene Location: 837-1115 bp Feature: gene Location: 1207-1620 bp Feature: domain Description: PDDEXK_2 Location: 1225-1423 bp Feature: domain Description: PDDEXK_2 Location: 1225-14 23 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, PDDEXK_2 (pfam12784)