myRT

myRT report for GCA_000743395.1_SAS_1

Download annotations/find similar RTs

Seq: KN050642.1 Serratia marcescens strain CDC_813-60 genomic scaffold scaffold1, whole genome shotgun sequence (5088378 bp)
Overview 1 RT 1: 545007-550713 bp 2 RT 2: 4785176-4790353 bp Neighborhood of RT #1 [545007, 550718] MipA RVT-UG4 FimA PRK15287 Neighborhood of RT #2 [4785176, 4790353] PerC RVT-DGRs Feature: gene Location: 545007-545795 bp Ori: KFL01587.1 Feature: domain Description: MipA Location: 545118-545793 bp Feature: domain Description: MipA Location: 5451 1 8-545793 bp Feature: gene Location: 547747-548586 bp Feature: gene Location: 548628-549431 bp Ori: KFL03457.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 548802-549249 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 548802-549249 bp Feature: gene Location: 549632-550207 bp Ori: KFL04452.1 Feature: domain Description: FimA Location: 549695-550205 bp Feature: domain Description: FimA Location: 549695-550205 bp Feature: gene Location: 550218-550718 bp Ori: KFL05264.1 Feature: domain Description: PRK15287 Location: 550272-550713 bp Feature: domain Description: PRK1 5287 Location: 550272-55071 3 bp Feature: gene Location: 4785176-4785604 bp Feature: gene Location: 4786414-4786554 bp Ori: KFL02047.1 Feature: domain Description: PerC Location: 4786420-4786543 bp Feature: domain Description: PerC Location: 4786420-4786543 bp Feature: gene Location: 4787859-4789130 bp Ori: KFL04521.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4788051-4788747 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4788051 -4788747 bp Feature: gene Location: 4789081-4789296 bp Feature: gene Location: 4790048-4790353 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MipA (pfam06629), RVT-UG4, FimA (pfam16970), PRK15287 (fimbrial minor subunit StfF), PerC (pfam06069), RVT-DGRs