myRT

myRT report for GCA_000744515.1_ASM74451v1

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Seq: JQMC01000041.1 Sphingomonas wittichii strain YR128 EX04DRAFT_scaffold00041.41_C, whole genome shotgun sequence (29166 bp)
Overview 1 RT 1: 24542-28992 bp Neighborhood of RT #1 [24542, 29165] AcrR RVT-GII GIIM COG3547 rve_3 Feature: gene Location: 24542-25195 bp Feature: domain Description: AcrR Location: 24569-25100 bp Feature: domain Description: AcrR Location: 24569-251 00 bp Feature: gene Location: 25436-25642 bp Feature: gene Location: 26138-27427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26387-27050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26387-27050 bp Feature: domain Description: GIIM Note: maturase Location: 27119-27335 bp Feature: domain Description: GIIM Note: maturase Location: 271 1 9-27335 bp Feature: gene Location: 27576-28670 bp Feature: domain Description: COG3547 Location: 27639-28611 bp Feature: domain Description: COG3547 Location: 27639-2861 1 bp Feature: gene Location: 28881-29165 bp Feature: domain Description: rve_3 Location: 28893-28992 bp Feature: domain Description: rve_3 Location: 28893-28992 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), rve_3 (pfam13683)

Seq: JQMC01000065.1 Sphingomonas wittichii strain YR128 EX04DRAFT_scaffold00065.65_C, whole genome shotgun sequence (5210 bp)
Overview 1 RT 1: 335-4875 bp Neighborhood of RT #1 [335, 4875] RVT-UG28 sbcB Feature: gene Location: 335-721 bp Feature: gene Location: 939-1067 bp Feature: gene Location: 1191-2717 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 1476-2145 bp Feature: RT Description: RVT-UG2 8 Note: UG2 8 RT Location: 1476-2 145 bp Feature: gene Location: 2733-4127 bp Feature: domain Description: sbcB Note: exonuclease Location: 2745-4005 bp Feature: domain Description: sbcB Note: exonuclease Location: 2 745-4005 bp Feature: gene Location: 4318-4875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28, sbcB (PRK11779)