myRT

myRT report for GCA_000745215.1_ASM74521v1

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Seq: JQNK01000001.1 Methylosinus sp. PW1 K369DRAFT_unitig_12_quiver.10_C, whole genome shotgun sequence (77752 bp)
Overview 1 RT 1: 16717-21293 bp 2 RT 2: 70602-75808 bp Neighborhood of RT #1 [16717, 21343] DDE_Tnp_1_assoc YhhI Tra5 RVT-GII GIIM HTH_32 COG3547 Neighborhood of RT #2 [70602, 75849] RVT-GII GIIM COG4584 IstB_IS21 Feature: gene Location: 16717-17277 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 16738-16996 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 1 6738-1 6996 bp Feature: domain Description: YhhI Location: 17155-17263 bp Feature: domain Description: YhhI Location: 1 71 55-1 7263 bp Feature: gene Location: 17347-18018 bp Feature: domain Description: Tra5 Location: 17437-17860 bp Feature: domain Description: Tra5 Location: 1 7437-1 7860 bp Feature: gene Location: 18029-19273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18230-18887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8230-1 8887 bp Feature: domain Description: GIIM Note: maturase Location: 18968-19187 bp Feature: domain Description: GIIM Note: maturase Location: 1 8968-1 91 87 bp Feature: gene Location: 19761-20186 bp Feature: domain Description: HTH_32 Location: 19887-20055 bp Feature: domain Description: HTH_32 Location: 1 9887-20055 bp Feature: gene Location: 20303-21343 bp Feature: domain Description: COG3547 Location: 20324-21293 bp Feature: domain Description: COG3547 Location: 20324-21 293 bp Feature: gene Location: 70602-71555 bp Feature: gene Location: 71558-71764 bp Feature: gene Location: 72040-73341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72325-72961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72325-72961 bp Feature: domain Description: GIIM Note: maturase Location: 73036-73255 bp Feature: domain Description: GIIM Note: maturase Location: 73036-73255 bp Feature: gene Location: 73622-75121 bp Feature: domain Description: COG4584 Location: 73691-74474 bp Feature: domain Description: COG4584 Location: 73691 -74474 bp Feature: gene Location: 75121-75849 bp Feature: domain Description: IstB_IS21 Location: 75283-75808 bp Feature: domain Description: IstB_IS21 Location: 75283-75808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_assoc (pfam13808), YhhI (COG5433), Tra5 (COG2801), RVT-GII, GIIM (pfam08388), HTH_32 (pfam13565), COG3547 (Transposase ), COG4584 (Transposase ), IstB_IS21 (pfam01695)

Seq: JQNK01000008.1 Methylosinus sp. PW1 K369DRAFT_unitig_20_quiver.5_C, whole genome shotgun sequence (780820 bp)
Overview 1 RT 1: 668580-675603 bp Neighborhood of RT #1 [668580, 675686] HslU INT_C_like_1 RVT-UNC COG4584 IstB_IS21 Feature: gene Location: 668580-669887 bp Feature: domain Description: HslU Location: 668586-669885 bp Feature: domain Description: HslU Location: 668586-669885 bp Feature: gene Location: 670176-671930 bp Feature: domain Description: INT_C_like_1 Location: 671235-671841 bp Feature: domain Description: INT_C_like_1 Location: 6712 35-671841 bp Feature: gene Location: 672156-673334 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 672465-672993 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 672 465-672 993 bp Feature: gene Location: 673376-674914 bp Feature: domain Description: COG4584 Location: 673412-674204 bp Feature: domain Description: COG4584 Location: 673412 -6742 04 bp Feature: gene Location: 674904-675686 bp Feature: domain Description: IstB_IS21 Location: 675078-675603 bp Feature: domain Description: IstB_IS2 1 Location: 675078-675603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HslU (COG1220), INT_C_like_1 (cd01184), RVT-UG11/RVT-DGRs/RVT-CRISPR(RVT-UNC), COG4584 (Transposase ), IstB_IS21 (pfam01695)