myRT

myRT report for GCA_000745655.1_ASM74565v1

Download annotations/find similar RTs

Seq: JQJS01000008.1 Rhizobium leguminosarum strain OV483 EX02DRAFT_scaffold00006.6_C, whole genome shotgun sequence (286654 bp)
Overview 1 RT 1: 271484-275283 bp Neighborhood of RT #1 [271484, 275283] RVT-GII RVT-GII Transposase_mut Feature: gene Location: 271484-271816 bp Feature: gene Location: 272019-272150 bp Feature: gene Location: 272721-273284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273024-273273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273024-273273 bp Feature: gene Location: 273328-274047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273334-273787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273334-273787 bp Feature: gene Location: 274421-275038 bp Feature: domain Description: Transposase_mut Location: 274424-274952 bp Feature: domain Description: Transposase_mut Location: 274424-274952 bp Feature: gene Location: 275140-275283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Transposase_mut (pfam00872)

Seq: JQJS01000014.1 Rhizobium leguminosarum strain OV483 EX02DRAFT_scaffold00012.12_C, whole genome shotgun sequence (187177 bp)
Overview 1 RT 1: 183887-187157 bp Neighborhood of RT #1 [183887, 187174] DDE_Tnp_ISAZ013 RVT-GII GIIM DDE_Tnp_ISAZ013 Feature: gene Location: 183887-184354 bp Feature: gene Location: 184516-185181 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 184543-185170 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 184543-185170 bp Feature: gene Location: 185231-186490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 185447-186101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 185447-186101 bp Feature: domain Description: GIIM Note: maturase Location: 186182-186398 bp Feature: domain Description: GIIM Note: maturase Location: 186182 -186398 bp Feature: gene Location: 187001-187174 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 187004-187157 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 187004-187157 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_ISAZ013 (pfam07592), RVT-GII, GIIM (pfam08388)

Seq: JQJS01000071.1 Rhizobium leguminosarum strain OV483 EX02DRAFT_scaffold00069.69_C, whole genome shotgun sequence (3837 bp)
Overview 1 RT 1: 1673-3782 bp Neighborhood of RT #1 [1673, 3835] PadR Tra8 RVT-GII Rve Feature: gene Location: 1673-2296 bp Feature: domain Description: PadR Location: 1691-1961 bp Feature: domain Description: PadR Location: 1691-1961 bp Feature: gene Location: 2314-2601 bp Feature: domain Description: Tra8 Location: 2326-2536 bp Feature: domain Description: Tra8 Location: 23 26-253 6 bp Feature: gene Location: 2800-3204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3004-3178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 004-3 178 bp Feature: gene Location: 3134-3490 bp Feature: gene Location: 3689-3835 bp Feature: domain Description: Rve Location: 3692-3782 bp Feature: domain Description: Rve Location: 3 692-3 782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PadR (pfam03551), Tra8 (COG2826), RVT-GII, Rve (COG3316)