myRT

myRT report for GCA_000745675.1_ASM74567v1

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Seq: JQJU01000005.1 Streptomyces atratus strain OK008 EW57DRAFT_scaffold00004.4_C, whole genome shotgun sequence (281945 bp)
Overview 1 RT 1: 95-3360 bp 2 RT 2: 56716-61590 bp Neighborhood of RT #1 [95, 3360] RVT-GII GIIM Tra5 Neighborhood of RT #2 [56716, 61640] GumC eps_transp_fam BY-kinase GT4_WbuB-like RVT-GII LPLAT_AGPAT-like SDR_a3 Feature: gene Location: 95-1255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 212-872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 2-872 bp Feature: domain Description: GIIM Note: maturase Location: 950-1172 bp Feature: domain Description: GIIM Note: maturase Location: 950-1 1 72 bp Feature: gene Location: 1891-2562 bp Feature: domain Description: Tra5 Location: 1936-2395 bp Feature: domain Description: Tra5 Location: 1 936-2395 bp Feature: gene Location: 2590-3360 bp Feature: gene Location: 56716-58407 bp Feature: domain Description: GumC Location: 56758-57022 bp Feature: domain Description: GumC Location: 56758-57022 bp Feature: domain Description: eps_transp_fam Location: 57142-57592 bp Feature: domain Description: eps_transp_fam Location: 571 42-57592 bp Feature: domain Description: BY-kinase Location: 57646-58228 bp Feature: domain Description: BY-kinase Location: 57646-58228 bp Feature: gene Location: 58404-59561 bp Feature: domain Description: GT4_WbuB-like Location: 58434-59472 bp Feature: domain Description: GT4_WbuB-like Location: 58434-59472 bp Feature: gene Location: 59879-60232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59888-60071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59888-60071 bp Feature: gene Location: 60610-61320 bp Feature: domain Description: LPLAT_AGPAT-like Location: 60655-61210 bp Feature: domain Description: LPLAT_AGPAT-like Location: 60655-61 21 0 bp Feature: gene Location: 61386-61640 bp Feature: domain Description: SDR_a3 Location: 61404-61590 bp Feature: domain Description: SDR_a3 Location: 61 404-61 590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tra5 (COG2801), GumC (COG3206), eps_transp_fam (TIGR01005), BY-kinase (cd05387), GT4_WbuB-like (cd03794), LPLAT_AGPAT-like (cd07989), SDR_a3 (cd05229)

Seq: KN050731.1 Streptomyces atratus strain OK008 genomic scaffold EW57DRAFT_scaffold00039.39, whole genome shotgun sequence (60264 bp)
Overview 1 RT 1: 337-2660 bp Neighborhood of RT #1 [337, 2800] RVT-GII GIIM HTH_32 HTH_Tnp_1 Feature: gene Location: 337-507 bp Feature: gene Location: 585-1844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1461 bp Feature: domain Description: GIIM Note: maturase Location: 1539-1761 bp Feature: domain Description: GIIM Note: maturase Location: 1539-1761 bp Feature: gene Location: 1881-2345 bp Feature: domain Description: HTH_32 Location: 2022-2190 bp Feature: domain Description: HTH_32 Location: 2 02 2 -2 190 bp Feature: gene Location: 2342-2800 bp Feature: domain Description: HTH_Tnp_1 Location: 2429-2660 bp Feature: domain Description: HTH_Tnp_1 Location: 2 42 9-2 660 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_32 (pfam13565), HTH_Tnp_1 (pfam01527)