myRT

myRT report for GCA_000745965.1_ASM74596v1

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Seq: KN050790.1 Edaphobacter aggregans DSM 19364 genomic scaffold Q363DRAFT_scaffold00006.6, whole genome shotgun sequence (199500 bp)
Overview 1 RT 1: 192527-197190 bp Neighborhood of RT #1 [192527, 197240] MauL RVT-GII MFS_LmrB_MDR_like Feature: gene Location: 192527-194032 bp Feature: gene Location: 194040-194774 bp Feature: domain Description: MauL Location: 194271-194502 bp Feature: domain Description: MauL Location: 1 94271 -1 94502 bp Feature: gene Location: 195158-195289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195182-195272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 951 82-1 95272 bp Feature: gene Location: 195345-195638 bp Feature: gene Location: 195735-197240 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 195738-197190 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 1 95738-1 971 90 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MauL (cd04221), RVT-GII, MFS_LmrB_MDR_like (cd17503)

Seq: JQKI01000129.1 Edaphobacter aggregans DSM 19364 Q363DRAFT_scaffold00118.118_C, whole genome shotgun sequence (13897 bp)
Overview 1 RT 1: 11639-13570 bp Neighborhood of RT #1 [11639, 13653] DHOR Y2_Tnp RVT-GII GIIM Feature: gene Location: 11639-12157 bp Feature: domain Description: DHOR Location: 11726-11999 bp Feature: domain Description: DHOR Location: 1172 6-11999 bp Feature: gene Location: 12242-12625 bp Feature: gene Location: 12856-13653 bp Feature: domain Description: Y2_Tnp Location: 12907-13132 bp Feature: domain Description: Y2 _Tnp Location: 12 907-13132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13156-13255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13156-132 55 bp Feature: domain Description: GIIM Note: maturase Location: 13354-13570 bp Feature: domain Description: GIIM Note: maturase Location: 13354-13570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DHOR (pfam06537), Y2_Tnp (pfam04986), RVT-GII, GIIM (pfam08388)

Seq: JQKI01000174.1 Edaphobacter aggregans DSM 19364 Q363DRAFT_scaffold00163.163_C, whole genome shotgun sequence (9599 bp)
Overview 1 RT 1: 2-2240 bp Neighborhood of RT #1 [2, 2335] RVT-GII TPR_12 TPR_12 Feature: gene Location: 2-175 bp Feature: gene Location: 240-1082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 651-1059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 651-1059 bp Feature: gene Location: 1181-1312 bp Feature: gene Location: 1463-2335 bp Feature: domain Description: TPR_12 Location: 1685-1895 bp Feature: domain Description: TPR_12 Location: 1685-1895 bp Feature: domain Description: TPR_12 Location: 2057-2240 bp Feature: domain Description: TPR_12 Location: 2057-2240 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TPR_12 (pfam13424)

Seq: JQKI01000185.1 Edaphobacter aggregans DSM 19364 Q363DRAFT_scaffold00174.174_C, whole genome shotgun sequence (9053 bp)
Overview 1 RT 1: 4158-7210 bp Neighborhood of RT #1 [4158, 7293] Phage_int_SAM_3 INT_Rci_Hp1_C RVT-GII Resolvase Feature: gene Location: 4158-5543 bp Feature: domain Description: Phage_int_SAM_3 Location: 4485-4647 bp Feature: domain Description: Phage_int_SAM_3 Location: 4 4 85-4 64 7 bp Feature: domain Description: INT_Rci_Hp1_C Location: 4956-5430 bp Feature: domain Description: INT_Rci_Hp1_C Location: 4 956-54 30 bp Feature: gene Location: 5782-5967 bp Feature: gene Location: 6043-6216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6046-6205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 604 6-6205 bp Feature: gene Location: 6284-6613 bp Feature: gene Location: 6757-7293 bp Feature: domain Description: Resolvase Location: 6769-7210 bp Feature: domain Description: Resolvase Location: 6769-7210 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_3 (pfam14659), INT_Rci_Hp1_C (cd00796), RVT-GII, Resolvase (smart00857)

Seq: JQKI01000220.1 Edaphobacter aggregans DSM 19364 Q363DRAFT_scaffold00209.209_C, whole genome shotgun sequence (6353 bp)
Overview 1 RT 1: 4221-6266 bp Neighborhood of RT #1 [4221, 6352] decahem_SO RVT-GII GIIM Feature: gene Location: 4221-5150 bp Feature: domain Description: decahem_SO Location: 4368-5133 bp Feature: domain Description: decahem_SO Location: 4368-5 133 bp Feature: gene Location: 5412-5708 bp Feature: gene Location: 5759-6352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5765-5963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 765 -5 963 bp Feature: domain Description: GIIM Note: maturase Location: 6044-6266 bp Feature: domain Description: GIIM Note: maturase Location: 6044-6266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT decahem_SO (TIGR03508), RVT-GII, GIIM (pfam08388)

Seq: JQKI01000246.1 Edaphobacter aggregans DSM 19364 Q363DRAFT_scaffold00235.235_C, whole genome shotgun sequence (4799 bp)
Overview 1 RT 1: 2433-4798 bp Neighborhood of RT #1 [2433, 4798] Peptidase_C39A RVT-GII GIIM Feature: gene Location: 2433-2987 bp Feature: domain Description: Peptidase_C39A Location: 2541-2958 bp Feature: domain Description: Peptidase_C39A Location: 2541-2958 bp Feature: gene Location: 2996-3370 bp Feature: gene Location: 4033-4575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4045-4195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4045-4195 bp Feature: domain Description: GIIM Note: maturase Location: 4270-4486 bp Feature: domain Description: GIIM Note: maturase Location: 4270-4486 bp Feature: gene Location: 4628-4798 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_C39A (cd02549), RVT-GII, GIIM (pfam08388)

Seq: JQKI01000276.1 Edaphobacter aggregans DSM 19364 Q363DRAFT_scaffold00265.265_C, whole genome shotgun sequence (3124 bp)
Overview 1 RT 1: 867-2504 bp Neighborhood of RT #1 [867, 2866] RVT-GII Feature: gene Location: 867-1010 bp Feature: gene Location: 1081-1227 bp Feature: gene Location: 1562-2866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1817-2504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1817 -2504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JQKI01000306.1 Edaphobacter aggregans DSM 19364 Q363DRAFT_scaffold00295.295_C, whole genome shotgun sequence (2189 bp)
Overview 1 RT 1: 139-1929 bp Neighborhood of RT #1 [139, 2087] RVT-GII RVT-GII GIIM RVT-GII GIIM Feature: gene Location: 139-555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 238-550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 238 -550 bp Feature: gene Location: 598-1158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 601-808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 601-8 08 bp Feature: domain Description: GIIM Note: maturase Location: 877-1096 bp Feature: domain Description: GIIM Note: maturase Location: 8 77-1096 bp Feature: gene Location: 1296-2087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1299-1659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1299-1659 bp Feature: domain Description: GIIM Note: maturase Location: 1713-1929 bp Feature: domain Description: GIIM Note: maturase Location: 1713-1929 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)