myRT

myRT report for GCA_000746335.1_ASM74633v1

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Seq: JQLB01000003.1 Rhizobium sp. YR060 EX03DRAFT_scaffold00003.3_C, whole genome shotgun sequence (721918 bp)
Overview 1 RT 1: 719086-721898 bp Neighborhood of RT #1 [719086, 721915] Crp Rve RVT-GII GIIM Feature: gene Location: 719086-719778 bp Feature: domain Description: Crp Location: 719116-719722 bp Feature: domain Description: Crp Location: 71 91 1 6-71 9722 bp Feature: gene Location: 720177-720662 bp Feature: domain Description: Rve Location: 720207-720588 bp Feature: domain Description: Rve Location: 720207-720588 bp Feature: gene Location: 720770-721915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 720929-721586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 720929-721 586 bp Feature: domain Description: GIIM Note: maturase Location: 721667-721898 bp Feature: domain Description: GIIM Note: maturase Location: 721 667-721 898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Crp (pfam00325), Rve (COG3316), RVT-GII, GIIM (pfam08388)

Seq: JQLB01000013.1 Rhizobium sp. YR060 EX03DRAFT_scaffold00012.12_C, whole genome shotgun sequence (178657 bp)
Overview 1 RT 1: 28394-33028 bp Neighborhood of RT #1 [28394, 33042] AcrR PRK08317 RVT-GII Zn_Tnp_IS1595 COG4544 Feature: gene Location: 28394-29077 bp Feature: domain Description: AcrR Location: 28418-29012 bp Feature: domain Description: AcrR Location: 2 8418-2 9012 bp Feature: gene Location: 29074-29937 bp Feature: domain Description: PRK08317 Location: 29179-29515 bp Feature: domain Description: PRK08317 Location: 2 9179-2 9515 bp Feature: gene Location: 30412-31401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30415-31024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30415-3102 4 bp Feature: gene Location: 31579-31791 bp Feature: domain Description: Zn_Tnp_IS1595 Location: 31648-31750 bp Feature: domain Description: Zn_Tnp_IS1595 Location: 31648-31750 bp Feature: gene Location: 32281-33042 bp Feature: domain Description: COG4544 Location: 32296-33028 bp Feature: domain Description: COG4544 Location: 32 2 96-3302 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), PRK08317 (hypothetical protein; Provisional), RVT-GII, Zn_Tnp_IS1595 (pfam12760), COG4544 (Uncharacterized conserved protein )