myRT

myRT report for GCA_000746395.1_ASM74639v1

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Seq: JQLE01000001.1 Streptomyces mirabilis strain YR139 EW58DRAFT_scaffold00001.1_C, whole genome shotgun sequence (506336 bp)
Overview 1 RT 1: 500185-506316 bp Neighborhood of RT #1 [500185, 506333] YtcJ_like COG4097 DDE_5 RVT-GII GIIM DUF4232 Feature: gene Location: 500185-502158 bp Feature: domain Description: YtcJ_like Location: 500290-500530 bp Feature: domain Description: YtcJ_like Location: 500290-500530 bp Feature: domain Description: COG4097 Location: 500881-502150 bp Feature: domain Description: COG4097 Location: 500881 -5021 50 bp Feature: gene Location: 502466-503149 bp Feature: domain Description: DDE_5 Location: 502532-503123 bp Feature: domain Description: DDE_5 Location: 502532-5031 23 bp Feature: gene Location: 503939-505237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 504212-504851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50421 2-504851 bp Feature: domain Description: GIIM Note: maturase Location: 504932-505154 bp Feature: domain Description: GIIM Note: maturase Location: 504932-5051 54 bp Feature: gene Location: 505565-505927 bp Feature: gene Location: 505980-506333 bp Feature: domain Description: DUF4232 Location: 505986-506316 bp Feature: domain Description: DUF4232 Location: 505986-50631 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YtcJ_like (cd01300), COG4097 (Predicted ferric reductase ), DDE_5 (pfam13546), RVT-GII, GIIM (pfam08388), DUF4232 (pfam14016)

Seq: JQLE01000011.1 Streptomyces mirabilis strain YR139 EW58DRAFT_scaffold00009.9_C, whole genome shotgun sequence (286657 bp)
Overview 1 RT 1: 42-2575 bp Neighborhood of RT #1 [42, 2575] Tra5 InsE RVT-GII GIIM Nterm_IS4 Feature: gene Location: 42-695 bp Feature: domain Description: Tra5 Location: 57-675 bp Feature: domain Description: Tra5 Location: 57-675 bp Feature: gene Location: 929-1282 bp Feature: domain Description: InsE Location: 938-1268 bp Feature: domain Description: InsE Location: 938-12 68 bp Feature: gene Location: 1289-1768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1331-1481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1331-1481 bp Feature: domain Description: GIIM Note: maturase Location: 1556-1712 bp Feature: domain Description: GIIM Note: maturase Location: 1556-1712 bp Feature: gene Location: 1664-2002 bp Feature: domain Description: Nterm_IS4 Location: 1829-1988 bp Feature: domain Description: Nterm_IS4 Location: 182 9-1988 bp Feature: gene Location: 2018-2575 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), InsE (COG2963), RVT-GII, GIIM (pfam08388), Nterm_IS4 (pfam13006)

Seq: JQLE01000079.1 Streptomyces mirabilis strain YR139 EW58DRAFT_scaffold00075.75_C, whole genome shotgun sequence (23828 bp)
Overview 1 RT 1: 17572-21477 bp Neighborhood of RT #1 [17572, 21521] DUF4096 RVT-GII RVT-GII DDE_Tnp_1 DDE_Tnp_1 Feature: gene Location: 17572-18213 bp Feature: domain Description: DUF4096 Location: 17578-17797 bp Feature: domain Description: DUF4096 Location: 17578-17797 bp Feature: gene Location: 18308-18514 bp Feature: gene Location: 18572-19420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18575-19214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18575-19214 bp Feature: gene Location: 19390-19782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19711-19759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19711-19759 bp Feature: gene Location: 20005-20904 bp Feature: gene Location: 21018-21521 bp Feature: domain Description: DDE_Tnp_1 Location: 21069-21333 bp Feature: domain Description: DDE_Tnp_1 Location: 21069-213 3 3 bp Feature: domain Description: DDE_Tnp_1 Location: 21345-21477 bp Feature: domain Description: DDE_Tnp_1 Location: 213 45-21477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4096 (pfam13340), RVT-GII, DDE_Tnp_1 (pfam01609)

Seq: JQLE01000084.1 Streptomyces mirabilis strain YR139 EW58DRAFT_scaffold00080.80_C, whole genome shotgun sequence (21625 bp)
Overview 1 RT 1: 14576-20723 bp Neighborhood of RT #1 [14576, 20723] PRK05899 PRK05899 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 14576-16789 bp Feature: domain Description: PRK05899 Location: 14927-15749 bp Feature: domain Description: PRK05899 Location: 14 927-1574 9 bp Feature: domain Description: PRK05899 Location: 15827-16778 bp Feature: domain Description: PRK05899 Location: 15827-16778 bp Feature: gene Location: 17135-17434 bp Feature: gene Location: 17923-19713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18187-18982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18187-18982 bp Feature: domain Description: Intron_maturas2 Location: 19084-19315 bp Feature: domain Description: Intron_maturas2 Location: 19084 -19315 bp Feature: domain Description: HNHc Note: nucleases Location: 19483-19669 bp Feature: domain Description: HNHc Note: nucleases Location: 194 83-19669 bp Feature: gene Location: 19939-20259 bp Feature: gene Location: 20436-20723 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05899 (transketolase; Reviewed), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)