myRT

myRT report for GCA_000746935.1_BMS

Download annotations/find similar RTs

Seq: KN125582.1 Bacillus megaterium strain BMS genomic scaffold scaffold2, whole genome shotgun sequence (280279 bp)
Overview 1 RT 1: 186252-190589 bp Neighborhood of RT #1 [186252, 190615] HU RVT_N RVT-GII GIIM PadR Feature: gene Location: 186252-186524 bp Feature: domain Description: HU Location: 186258-186513 bp Feature: domain Description: HU Location: 1 86258-1 8651 3 bp Feature: gene Location: 186946-187164 bp Feature: gene Location: 187872-189521 bp Feature: RT Description: RVT_N Location: 187920-188166 bp Feature: RT Description: RVT_N Location: 1 87920-1 881 66 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 188220-188880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 88220-1 88880 bp Feature: domain Description: GIIM Note: maturase Location: 188949-189180 bp Feature: domain Description: GIIM Note: maturase Location: 1 88949-1 891 80 bp Feature: gene Location: 189896-190084 bp Feature: gene Location: 190280-190615 bp Feature: domain Description: PadR Location: 190331-190589 bp Feature: domain Description: PadR Location: 1 90331 -1 90589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HU (cd13831), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PadR (pfam03551)

Seq: KN125581.1 Bacillus megaterium strain BMS genomic scaffold scaffold1, whole genome shotgun sequence (5244411 bp)
Overview 1 RT 1: 3663227-3671306 bp Neighborhood of RT #1 [3663227, 3671716] GAT1_cyanophycinase RocR RVT-GII Intron_maturas2 HNHc RocR GAT1_cyanophycinase GAT1_cyanophycinase Feature: gene Location: 3663227-3664303 bp Feature: domain Description: GAT1_cyanophycinase Location: 3663398-3664067 bp Feature: domain Description: GAT1_cyanophycinase Location: 3663398-3664067 bp Feature: gene Location: 3664378-3665073 bp Feature: domain Description: RocR Location: 3664381-3664888 bp Feature: domain Description: RocR Location: 3664381-3664888 bp Feature: gene Location: 3665214-3667028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3665478-3666306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3665478-3666306 bp Feature: domain Description: Intron_maturas2 Location: 3666384-3666678 bp Feature: domain Description: Intron_maturas2 Location: 3666384-3666678 bp Feature: domain Description: HNHc Note: nucleases Location: 3666825-3666999 bp Feature: domain Description: HNHc Note: nucleases Location: 366682 5-3666999 bp Feature: gene Location: 3667578-3668951 bp Feature: domain Description: RocR Location: 3668169-3668892 bp Feature: domain Description: RocR Location: 3668169-3668892 bp Feature: gene Location: 3669164-3671716 bp Feature: domain Description: GAT1_cyanophycinase Location: 3669275-3670052 bp Feature: domain Description: GAT1_cyanophycinase Location: 36692 75-3670052 bp Feature: domain Description: GAT1_cyanophycinase Location: 3670556-3671306 bp Feature: domain Description: GAT1_cyanophycinase Location: 3670556-3671306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GAT1_cyanophycinase (cd03145), RocR (COG3829), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)