myRT

myRT report for GCA_000749925.1_ASM74992v1

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Seq: JQHL01000027.1 Pectobacterium betavasculorum strain NCPPB 2793 ID_53, whole genome shotgun sequence (19749 bp)
Overview 1 RT 1: 13241-18417 bp Neighborhood of RT #1 [13241, 18419] Dam Dam PRK05318 RVT-UG17 SLATT_5 PRK13708 Feature: gene Location: 13241-13912 bp Ori: KFX12324.1 Feature: domain Description: Dam Location: 13244-13415 bp Feature: domain Description: Dam Location: 1 3244-1 341 5 bp Feature: domain Description: Dam Location: 13490-13700 bp Feature: domain Description: Dam Location: 1 3490-1 3700 bp Feature: gene Location: 14282-15655 bp Ori: KFX12325.1 Feature: domain Description: PRK05318 Location: 14300-15620 bp Feature: domain Description: PRK0531 8 Location: 1 4300-1 5620 bp Feature: gene Location: 15821-17194 bp Ori: KFX12326.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 16052-16658 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 6052-1 6658 bp Feature: gene Location: 17187-17726 bp Ori: KFX12327.1 Feature: domain Description: SLATT_5 Location: 17193-17712 bp Feature: domain Description: SLATT_5 Location: 1 71 93-1 771 2 bp Feature: gene Location: 18114-18419 bp Ori: KFX12328.1 Feature: domain Description: PRK13708 Location: 18117-18417 bp Feature: domain Description: PRK1 3708 Location: 1 81 1 7-1 841 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dam (pfam05869), PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), RVT-UG17, SLATT_5 (pfam18160), PRK13708 (type II toxin-antitoxin system toxin CcdB)

Seq: JQHL01000010.1 Pectobacterium betavasculorum strain NCPPB 2793 ID_19, whole genome shotgun sequence (90354 bp)
Overview 1 RT 1: 34897-41101 bp Neighborhood of RT #1 [34897, 41103] InsE RVT-GII GIIM COG2932 nrdF2 Feature: gene Location: 34897-35214 bp Ori: KFX18284.1 Feature: domain Description: InsE Location: 34909-35185 bp Feature: domain Description: InsE Location: 34909-35185 bp Feature: gene Location: 35234-35419 bp Feature: gene Location: 36254-37777 bp Ori: KFX18286.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36527-37259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3652 7-372 59 bp Feature: domain Description: GIIM Note: maturase Location: 37355-37532 bp Feature: domain Description: GIIM Note: maturase Location: 37355-37532 bp Feature: gene Location: 38507-39103 bp Ori: KFX18287.1 Feature: domain Description: COG2932 Location: 38645-39098 bp Feature: domain Description: COG2 932 Location: 38645-39098 bp Feature: gene Location: 40141-41103 bp Ori: KFX18288.1 Feature: domain Description: nrdF2 Location: 40153-41101 bp Feature: domain Description: nrdF2 Location: 40153-41101 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), COG2932 (Phage repressor protein C, contains Cro/C1-type HTH and peptidase s24 domains ), nrdF2 (PRK13966)