myRT

myRT report for GCA_000750635.1_PRJEB5524_assembly_1

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Seq: CCDM010000001.1 Oceanobacillus jeddahense genome assembly, contig: 00001, whole genome shotgun sequence (1739825 bp)
Overview 1 RT 1: 573811-578525 bp 2 RT 2: 677074-682060 bp Neighborhood of RT #1 [573811, 578626] spxA RVT-GII GIIM YitT Neighborhood of RT #2 [677074, 682098] TDH_SDR_e RVT-GII GIIM AcrR SLC-NCS1sbd_CobB-like Feature: gene Location: 573811-574221 bp Feature: domain Description: spxA Location: 573820-574183 bp Feature: domain Description: spxA Location: 573820-5741 83 bp Feature: gene Location: 574253-574606 bp Feature: gene Location: 575215-576561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 575488-576103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 575488-5761 03 bp Feature: domain Description: GIIM Note: maturase Location: 576163-576376 bp Feature: domain Description: GIIM Note: maturase Location: 5761 63-576376 bp Feature: gene Location: 576697-577428 bp Feature: gene Location: 577715-578626 bp Feature: domain Description: YitT Location: 577718-578525 bp Feature: domain Description: YitT Location: 57771 8-578525 bp Feature: gene Location: 677074-678024 bp Feature: domain Description: TDH_SDR_e Location: 677083-677992 bp Feature: domain Description: TDH_SDR_e Location: 677083-677992 bp Feature: gene Location: 678071-678301 bp Feature: gene Location: 678565-679911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 678838-679453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 678838-679453 bp Feature: domain Description: GIIM Note: maturase Location: 679513-679726 bp Feature: domain Description: GIIM Note: maturase Location: 67951 3-679726 bp Feature: gene Location: 680228-680821 bp Feature: domain Description: AcrR Location: 680246-680609 bp Feature: domain Description: AcrR Location: 680246-680609 bp Feature: gene Location: 680818-682098 bp Feature: domain Description: SLC-NCS1sbd_CobB-like Location: 680848-682060 bp Feature: domain Description: SLC-NCS1 sbd_CobB-like Location: 680848-682060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT spxA (PRK13344), RVT-GII, GIIM (pfam08388), YitT (COG1284), TDH_SDR_e (cd05272), AcrR (COG1309), SLC-NCS1sbd_CobB-like (cd11484)