myRT

myRT report for GCA_000751075.1_Rickettsia_tamurae_AT-1

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Seq: CCMG01000001.1 Rickettsia tamurae genome assembly Rickettsia tamurae AT-1, contig contig00001, whole genome shotgun sequence (22700 bp)
Overview 1 RT 1: 3425-7856 bp Neighborhood of RT #1 [3425, 7909] RVT-GII group_II_RT_mat RVT-GII GIIM SpoT TraD Feature: gene Location: 3425-3553 bp Feature: gene Location: 4214-4354 bp Feature: gene Location: 4419-4649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4422-4635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4422-4635 bp Feature: gene Location: 5066-5263 bp Feature: gene Location: 5265-5405 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5301-5403 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5301 -5403 bp Feature: gene Location: 5446-6507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5458-6121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5458-61 21 bp Feature: domain Description: GIIM Note: maturase Location: 6202-6421 bp Feature: domain Description: GIIM Note: maturase Location: 6202-6421 bp Feature: gene Location: 7123-7410 bp Feature: domain Description: SpoT Location: 7192-7399 bp Feature: domain Description: SpoT Location: 71 92-7399 bp Feature: gene Location: 7748-7909 bp Feature: domain Description: TraD Location: 7754-7856 bp Feature: domain Description: TraD Location: 7754-7856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), GIIM (pfam08388), SpoT (COG0317), TraD (pfam06412)

Seq: CCMG01000005.1 Rickettsia tamurae genome assembly Rickettsia tamurae AT-1, contig contig00005, whole genome shotgun sequence (5502 bp)
Overview 1 RT 1: 1-2188 bp Neighborhood of RT #1 [1, 2193] TraA_Ti RVT-GII InsE Feature: gene Location: 1-888 bp Feature: domain Description: TraA_Ti Location: 40-886 bp Feature: domain Description: TraA_Ti Location: 40-886 bp Feature: gene Location: 1086-1376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1110-1332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1110-1332 bp Feature: gene Location: 1687-1848 bp Feature: gene Location: 1906-2193 bp Feature: domain Description: InsE Location: 1924-2188 bp Feature: domain Description: InsE Location: 192 4-2 188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TraA_Ti (TIGR02768), InsE (COG2963)