myRT

myRT report for GCA_000751195.1_Serratia_assembly

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Seq: CCNF01000027.1 Serratia marcescens genome assembly Serratia assembly, contig contig_27, whole genome shotgun sequence (57257 bp)
Overview 1 RT 1: 1451-7799 bp Neighborhood of RT #1 [1451, 8419] CaiF_GrlA RVT-DGRs LysM IAT_beta Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Feature: gene Location: 1451-1912 bp Feature: domain Description: CaiF_GrlA Location: 1526-1793 bp Feature: domain Description: CaiF_GrlA Location: 1 526-1 793 bp Feature: gene Location: 2189-2323 bp Feature: gene Location: 2469-3740 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2661-3357 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2661 -3357 bp Feature: gene Location: 4100-4573 bp Feature: gene Location: 4658-8419 bp Feature: domain Description: LysM Location: 4841-4979 bp Feature: domain Description: LysM Location: 4841 -4979 bp Feature: domain Description: IAT_beta Location: 5069-5888 bp Feature: domain Description: IAT_beta Location: 5069-5888 bp Feature: domain Description: Invasin_D3 Location: 6221-6509 bp Feature: domain Description: Invasin_D3 Location: 6221 -6509 bp Feature: domain Description: Invasin_D3 Location: 6530-6839 bp Feature: domain Description: Invasin_D3 Location: 6530-6839 bp Feature: domain Description: Invasin_D3 Location: 6863-7172 bp Feature: domain Description: Invasin_D3 Location: 6863-71 72 bp Feature: domain Description: Invasin_D3 Location: 7196-7505 bp Feature: domain Description: Invasin_D3 Location: 71 96-7505 bp Feature: domain Description: Invasin_D3 Location: 7523-7799 bp Feature: domain Description: Invasin_D3 Location: 7523-7799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CaiF_GrlA (pfam07180), RVT-DGRs, LysM (smart00257), IAT_beta (pfam11924), Invasin_D3 (pfam09134)

Seq: CCNF01000044.1 Serratia marcescens genome assembly Serratia assembly, contig contig_44, whole genome shotgun sequence (22248 bp)
Overview 1 RT 1: 187-3399 bp Neighborhood of RT #1 [187, 3404] RVT-UG4 FimA PRK15287 Feature: gene Location: 187-378 bp Feature: gene Location: 433-1272 bp Feature: gene Location: 1314-2300 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1671-2118 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1671-2 118 bp Feature: gene Location: 2318-2893 bp Feature: domain Description: FimA Location: 2381-2891 bp Feature: domain Description: FimA Location: 2 381-2 891 bp Feature: gene Location: 2904-3404 bp Feature: domain Description: PRK15287 Location: 2958-3399 bp Feature: domain Description: PRK152 87 Location: 2 958-3399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, FimA (pfam16970), PRK15287 (fimbrial minor subunit StfF)