myRT

myRT report for GCA_000752235.1_FHI69

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Seq: CCQP01000059.1 (22000 bp)
Overview 1 RT 1: 6487-10094 bp Neighborhood of RT #1 [6487, 10094] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 6487-6615 bp Feature: gene Location: 6465-6944 bp Feature: domain Description: PHA02517 Location: 6525-6879 bp Feature: domain Description: PHA0251 7 Location: 6525-6879 bp Feature: gene Location: 7536-9059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7809-8541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7809-8541 bp Feature: domain Description: GIIM Note: maturase Location: 8616-8814 bp Feature: domain Description: GIIM Note: maturase Location: 861 6-881 4 bp Feature: gene Location: 9155-9628 bp Feature: domain Description: PHA02517 Location: 9161-9617 bp Feature: domain Description: PHA0251 7 Location: 91 61 -961 7 bp Feature: gene Location: 9711-10094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: CCQP01000024.1 (37866 bp)
Overview 1 RT 1: 8345-12105 bp Neighborhood of RT #1 [8345, 12105] DUF932 RVT-GII Intron_maturas2 HNHc DUF932 Feature: gene Location: 8345-8545 bp Feature: gene Location: 8584-8970 bp Feature: domain Description: DUF932 Location: 8590-8935 bp Feature: domain Description: DUF932 Location: 8590-8935 bp Feature: gene Location: 9143-10921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9404-10199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9404-10199 bp Feature: domain Description: Intron_maturas2 Location: 10325-10550 bp Feature: domain Description: Intron_maturas2 Location: 1032 5-10550 bp Feature: domain Description: HNHc Note: nucleases Location: 10745-10895 bp Feature: domain Description: HNHc Note: nucleases Location: 10745-10895 bp Feature: gene Location: 11413-11814 bp Feature: domain Description: DUF932 Location: 11524-11806 bp Feature: domain Description: DUF932 Location: 1152 4-11806 bp Feature: gene Location: 11917-12105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)