myRT

myRT report for GCA_000753075.1_FHI73

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Seq: CCQR01000038.1 (126913 bp)
Overview 1 RT 1: 60219-63788 bp Neighborhood of RT #1 [60219, 63814] RVT-GII GIIM COG3436 DDE_Tnp_IS66_C HTH_Tnp_ISL3 DDE_Tnp_ISL3 Feature: gene Location: 60219-60461 bp Feature: gene Location: 60684-60989 bp Feature: gene Location: 61032-62420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61362-61980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 362-61 980 bp Feature: domain Description: GIIM Note: maturase Location: 62028-62259 bp Feature: domain Description: GIIM Note: maturase Location: 62028-62259 bp Feature: gene Location: 62627-63148 bp Feature: domain Description: COG3436 Location: 62744-62942 bp Feature: domain Description: COG3436 Location: 62744-62942 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 63017-63125 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 6301 7-631 25 bp Feature: gene Location: 63152-63814 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 63425-63572 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 63425-63572 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 63623-63788 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 63623-63788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3436 (Transposase ), DDE_Tnp_IS66_C (pfam13817), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610)

Seq: CCQR01000083.1 (11719 bp)
Overview 1 RT 1: 256-4997 bp Neighborhood of RT #1 [256, 4997] PRK14702 DDE_Tnp_IS66 RVT-GII GIIM Feature: gene Location: 256-609 bp Feature: domain Description: PRK14702 Location: 259-598 bp Feature: domain Description: PRK14702 Location: 2 59-598 bp Feature: gene Location: 686-1210 bp Feature: domain Description: DDE_Tnp_IS66 Location: 785-1169 bp Feature: domain Description: DDE_Tnp_IS66 Location: 785-1169 bp Feature: gene Location: 1672-2904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1873-2527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1873-2 52 7 bp Feature: domain Description: GIIM Note: maturase Location: 2605-2827 bp Feature: domain Description: GIIM Note: maturase Location: 2 605-2 82 7 bp Feature: gene Location: 3422-4099 bp Feature: gene Location: 4629-4997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK14702 (insertion element IS2 transposase InsD; Provisional), DDE_Tnp_IS66 (pfam03050)

Seq: CCQR01000088.1 (24783 bp)
Overview 1 RT 1: 1-2330 bp Neighborhood of RT #1 [1, 2330] DDE_Tnp_1_assoc RVT-GII GIIM Feature: gene Location: 1-129 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 22-127 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 22-127 bp Feature: gene Location: 354-503 bp Feature: gene Location: 576-1826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 780-1437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 780-143 7 bp Feature: domain Description: GIIM Note: maturase Location: 1518-1740 bp Feature: domain Description: GIIM Note: maturase Location: 1518-1740 bp Feature: gene Location: 1850-2137 bp Feature: gene Location: 2190-2330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_assoc (pfam13808), RVT-GII, GIIM (pfam08388)