myRT

myRT report for GCA_000753155.1_FHI88

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Seq: CCQX01000090.1 (25131 bp)
Overview 1 RT 1: 18214-21414 bp Neighborhood of RT #1 [18214, 21746] InsE PHA02517 RVT-GII GIIM HTH_Tnp_1 HTH_Tnp_1 Feature: gene Location: 18214-18432 bp Feature: domain Description: InsE Location: 18220-18397 bp Feature: domain Description: InsE Location: 1 8220-1 8397 bp Feature: gene Location: 18436-18774 bp Feature: domain Description: PHA02517 Location: 18439-18739 bp Feature: domain Description: PHA0251 7 Location: 1 8439-1 8739 bp Feature: gene Location: 18891-20414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19164-19896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 91 64-1 9896 bp Feature: domain Description: GIIM Note: maturase Location: 19971-20169 bp Feature: domain Description: GIIM Note: maturase Location: 1 9971 -201 69 bp Feature: gene Location: 20368-20793 bp Feature: gene Location: 21006-21746 bp Feature: domain Description: HTH_Tnp_1 Location: 21018-21216 bp Feature: domain Description: HTH_Tnp_1 Location: 21 01 8-21 21 6 bp Feature: domain Description: HTH_Tnp_1 Location: 21321-21414 bp Feature: domain Description: HTH_Tnp_1 Location: 21 321 -21 41 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_Tnp_1 (pfam01527)

Seq: CCQX01000012.1 (31160 bp)
Overview 1 RT 1: 15636-18420 bp Neighborhood of RT #1 [15636, 18420] PRK09413 RVT-GII Feature: gene Location: 15636-15800 bp Feature: gene Location: 15811-16008 bp Feature: domain Description: PRK09413 Location: 15814-15976 bp Feature: domain Description: PRK09413 Location: 15814-15976 bp Feature: gene Location: 16484-17344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16805-17336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16805-17336 bp Feature: gene Location: 17538-17684 bp Feature: gene Location: 18019-18420 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09413 (IS2 repressor TnpA; Reviewed), RVT-GII