myRT

myRT report for GCA_000755055.1_YEG_1

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Seq: KN150735.1 Yersinia enterocolitica strain ATCC 9610 genomic scaffold scaffold1, whole genome shotgun sequence (4538553 bp)
Overview 1 RT 1: 2494301-2499575 bp 2 RT 2: 2792088-2797029 bp Neighborhood of RT #1 [2494301, 2499763] FocA PRK09692 RVT-UG17 SLATT_5 Ogr_Delta Neighborhood of RT #2 [2792088, 2797115] AlpA PRK09692 RVT-Retrons PRK09678 Feature: gene Location: 2494301-2495212 bp Ori: KGA71705.1 Gene: yfdC Feature: domain Description: FocA Location: 2494391-2495159 bp Feature: domain Description: FocA Location: 2494391 -24951 59 bp Feature: gene Location: 2495622-2496803 bp Ori: KGA71655.1 Feature: domain Description: PRK09692 Location: 2495631-2496780 bp Feature: domain Description: PRK09692 Location: 2495631 -2496780 bp Feature: gene Location: 2496800-2498134 bp Ori: KGA72116.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2497028-2497631 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 2497028-2497631 bp Feature: gene Location: 2498112-2498696 bp Ori: KGA70953.1 Feature: domain Description: SLATT_5 Location: 2498127-2498658 bp Feature: domain Description: SLATT_5 Location: 24981 27-2498658 bp Feature: gene Location: 2499416-2499763 bp Ori: KGA71505.1 Feature: domain Description: Ogr_Delta Location: 2499440-2499575 bp Feature: domain Description: Ogr_Delta Location: 2499440-2499575 bp Feature: gene Location: 2792088-2792291 bp Ori: KGA70929.1 Feature: domain Description: AlpA Location: 2792097-2792274 bp Feature: domain Description: AlpA Location: 2792097-2792274 bp Feature: gene Location: 2793022-2794218 bp Ori: KGA71628.1 Gene: intA Feature: domain Description: PRK09692 Location: 2793025-2794198 bp Feature: domain Description: PRK09692 Location: 2793025-27941 98 bp Feature: gene Location: 2794548-2795771 bp Ori: KGA72007.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2794698-2795316 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2794698-279531 6 bp Feature: gene Location: 2795789-2796541 bp Feature: gene Location: 2796870-2797115 bp Ori: KGA70654.1 Feature: domain Description: PRK09678 Location: 2796873-2797029 bp Feature: domain Description: PRK09678 Location: 2796873-2797029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FocA (COG2116), PRK09692 (Integrase; provisional), RVT-UG17, SLATT_5 (pfam18160), Ogr_Delta (pfam04606), AlpA (COG3311), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional)