myRT

myRT report for GCA_000755345.1_ASM75534v1

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Seq: BBMN01000010.1 Photobacterium aphoticum DNA, contig: contig00010, strain: JCM 19237, whole genome shotgun sequence (170838 bp)
Overview 1 RT 1: 87484-90238 bp Neighborhood of RT #1 [87484, 90279] RVT-CRISPR Cas_Cas1 Cas1_I-II-III Feature: gene Location: 87484-87951 bp Feature: gene Location: 87935-88240 bp Feature: gene Location: 88539-89237 bp Ori: GAL06229.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 88548-89157 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 88548-891 57 bp Feature: gene Location: 89357-90010 bp Ori: GAL06230.1 Feature: domain Description: Cas_Cas1 Location: 89360-89936 bp Feature: domain Description: Cas_Cas1 Location: 89360-89936 bp Feature: gene Location: 90025-90279 bp Ori: GAL06231.1 Feature: domain Description: Cas1_I-II-III Location: 90028-90238 bp Feature: domain Description: Cas1 _I-II-III Location: 90028-90238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas_Cas1 (pfam01867), Cas1_I-II-III (cl00656)

Seq: BBMN01000012.1 Photobacterium aphoticum DNA, contig: contig00012, strain: JCM 19237, whole genome shotgun sequence (144338 bp)
Overview 1 RT 1: 108584-113853 bp Neighborhood of RT #1 [108584, 113853] LodA RVT-Retrons Feature: gene Location: 108584-109573 bp Feature: gene Location: 110050-110559 bp Ori: GAL06687.1 Feature: domain Description: LodA Location: 110305-110527 bp Feature: domain Description: LodA Location: 110305-11052 7 bp Feature: gene Location: 110541-111455 bp Ori: GAL06688.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 110793-111405 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 110793-111405 bp Feature: gene Location: 111484-111822 bp Feature: gene Location: 112210-113853 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LodA (cd14732), RVT-Retrons