myRT

myRT report for GCA_000757235.1_BEG

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Seq: KN150957.1 Burkholderia pseudomallei strain BEG genomic scaffold scaffold1, whole genome shotgun sequence (4213394 bp)
Overview 1 RT 1: 455635-460187 bp 2 RT 2: 1119307-1125015 bp Neighborhood of RT #1 [455635, 460187] CxxCxxCC RVT-UG17 SLATT_5 Neighborhood of RT #2 [1119307, 1125044] PRK07090 HTH_XRE Cupin_2 RVT-Retrons HTH_XRE major_cap_HK97 Feature: gene Location: 455635-456123 bp Feature: gene Location: 456381-456869 bp Ori: KGD48964.1 Feature: domain Description: CxxCxxCC Location: 456507-456723 bp Feature: domain Description: CxxCxxCC Location: 456507-456723 bp Feature: gene Location: 457154-458554 bp Ori: KGD48981.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 457388-458000 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 457388-458000 bp Feature: gene Location: 458762-459400 bp Ori: KGD48995.1 Feature: domain Description: SLATT_5 Location: 458765-459362 bp Feature: domain Description: SLATT_5 Location: 458765-459362 bp Feature: gene Location: 459453-460187 bp Feature: gene Location: 1119307-1120089 bp Ori: KGD46410.1 Feature: domain Description: PRK07090 Location: 1119310-1120087 bp Feature: domain Description: PRK07090 Location: 1 1 1 931 0-1 1 20087 bp Feature: gene Location: 1120221-1120784 bp Ori: KGD46403.1 Feature: domain Description: HTH_XRE Location: 1120233-1120398 bp Feature: domain Description: HTH_XRE Location: 1 1 20233-1 1 20398 bp Feature: domain Description: Cupin_2 Location: 1120554-1120746 bp Feature: domain Description: Cupin_2 Location: 1 1 20554-1 1 20746 bp Feature: gene Location: 1121576-1122601 bp Ori: KGD46454.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1121747-1122266 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 21 747-1 1 22266 bp Feature: gene Location: 1122558-1122881 bp Ori: KGD46475.1 Feature: domain Description: HTH_XRE Location: 1122567-1122732 bp Feature: domain Description: HTH_XRE Location: 1 1 22567-1 1 22732 bp Feature: gene Location: 1123761-1125044 bp Ori: KGD46462.1 Feature: domain Description: major_cap_HK97 Location: 1123935-1125015 bp Feature: domain Description: major_cap_HK97 Location: 1 1 23935-1 1 2501 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CxxCxxCC (pfam03692), RVT-UG17, SLATT_5 (pfam18160), PRK07090 (class II aldolase/adducin domain protein; Provisional), HTH_XRE (smart00530), Cupin_2 (pfam07883), RVT-Retrons, major_cap_HK97 (TIGR01554)