myRT

myRT report for GCA_000757725.1_ASM75772v1

Download annotations/find similar RTs

Seq: JJMU01000066.1 Sphingobacterium deserti strain ACCC 05744 h2665, whole genome shotgun sequence (183268 bp)
Overview 1 RT 1: 146966-152789 bp Neighborhood of RT #1 [146966, 152789] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Bac_Flav_CT_G Feature: gene Location: 146966-147628 bp Feature: gene Location: 147648-148307 bp Ori: KGE12642.1 Feature: domain Description: Bac_Flav_CT_G Location: 147762-148176 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 47762-1 481 76 bp Feature: gene Location: 148307-149968 bp Ori: KGE12643.1 Feature: domain Description: RVT_N Location: 148358-148601 bp Feature: domain Description: RVT_N Location: 1 48358-1 48601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148646-149294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 48646-1 49294 bp Feature: domain Description: GIIM Note: maturase Location: 149348-149582 bp Feature: domain Description: GIIM Note: maturase Location: 1 49348-1 49582 bp Feature: gene Location: 150554-152515 bp Ori: KGE12644.1 Feature: domain Description: Bac_Flav_CT_G Location: 150698-150914 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 50698-1 5091 4 bp Feature: domain Description: Bac_Flav_CT_G Location: 151049-152495 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 51 049-1 52495 bp Feature: gene Location: 152487-152789 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JJMU01000029.1 Sphingobacterium deserti strain ACCC 05744 h2628, whole genome shotgun sequence (151603 bp)
Overview 1 RT 1: 124705-131419 bp Neighborhood of RT #1 [124705, 132258] HTH_XRE RVT-UG5 CarbopepD_reg_2 Feature: gene Location: 124705-125133 bp Ori: KGE14245.1 Feature: domain Description: HTH_XRE Location: 124738-124903 bp Feature: domain Description: HTH_XRE Location: 12 4738-12 4903 bp Feature: gene Location: 125311-126534 bp Feature: gene Location: 126773-130192 bp Ori: KGE14247.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 127247-127745 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 12 72 47-12 7745 bp Feature: gene Location: 130220-130879 bp Feature: gene Location: 131080-132258 bp Ori: KGE14249.1 Feature: domain Description: CarbopepD_reg_2 Location: 131155-131419 bp Feature: domain Description: CarbopepD_reg_2 Location: 131155-131419 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-UG5, CarbopepD_reg_2 (pfam13715)