myRT

myRT report for GCA_000759165.1_04_NF40_HMP2136v01

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Seq: JRNM01000142.1 Prevotella bivia DNF00650 contig142, whole genome shotgun sequence (1648 bp)
Overview 1 RT 1: 103-1321 bp Neighborhood of RT #1 [103, 1509] RVT-GII GIIM Feature: gene Location: 103-1509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445-1063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445-1 063 bp Feature: domain Description: GIIM Note: maturase Location: 1117-1321 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 1 7-1 321 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JRNM01000027.1 Prevotella bivia DNF00650 contig027, whole genome shotgun sequence (19916 bp)
Overview 1 RT 1: 16990-19847 bp Neighborhood of RT #1 [16990, 19909] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-GII Feature: gene Location: 16990-17292 bp Feature: gene Location: 17669-18868 bp Feature: domain Description: Arm-DNA-bind_5 Location: 17699-17936 bp Feature: domain Description: Arm-DNA-bind_5 Location: 17699-17936 bp Feature: domain Description: Phage_int_SAM_5 Location: 18017-18311 bp Feature: domain Description: Phage_int_SAM_5 Location: 18017-18311 bp Feature: domain Description: INTN1_C_like Location: 18356-18851 bp Feature: domain Description: INTN1_C_like Location: 18356-18851 bp Feature: gene Location: 19415-19909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19679-19847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19679-19847 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-GII