myRT

myRT report for GCA_000759675.1_ASM75967v1

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Seq: BAWM01000139.1 Bacillus niacini DNA, contig: Contig139, whole genome shotgun sequence (176062 bp)
Overview 1 RT 1: 85198-91333 bp Neighborhood of RT #1 [85198, 91338] HTH_XRE RVT-UG7 PRK06762 Feature: gene Location: 85198-85554 bp Feature: domain Description: HTH_XRE Location: 85213-85387 bp Feature: domain Description: HTH_XRE Location: 8521 3-85387 bp Feature: gene Location: 86223-88025 bp Feature: gene Location: 88149-89879 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 88746-89130 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 88746-891 30 bp Feature: gene Location: 90147-90638 bp Feature: gene Location: 90841-91338 bp Feature: domain Description: PRK06762 Location: 90850-91333 bp Feature: domain Description: PRK06762 Location: 90850-91 333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-UG7, PRK06762 (hypothetical protein; Provisional)

Seq: BAWM01000128.1 Bacillus niacini DNA, contig: Contig128, whole genome shotgun sequence (676 bp)
Overview 1 RT 1: 105-588 bp Neighborhood of RT #1 [105, 674] RVT-GII GIIM Feature: gene Location: 105-674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108-294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108-2 94 bp Feature: domain Description: GIIM Note: maturase Location: 384-588 bp Feature: domain Description: GIIM Note: maturase Location: 384-588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BAWM01000120.1 Bacillus niacini DNA, contig: Contig120, whole genome shotgun sequence (298 bp)
Overview 1 RT 1: 2-296 bp Neighborhood of RT #1 [2, 295] RVT-GII Feature: gene Location: 2-295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-296 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: BAWM01000104.1 Bacillus niacini DNA, contig: Contig104, whole genome shotgun sequence (1387 bp)
Overview 1 RT 1: 649-1387 bp Neighborhood of RT #1 [649, 1386] RVT-GII Feature: gene Location: 649-1386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 916-1387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 916-1387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: BAWM01000077.1 Bacillus niacini DNA, contig: Contig77, whole genome shotgun sequence (1880 bp)
Overview 1 RT 1: 83-1241 bp Neighborhood of RT #1 [83, 1327] RVT-GII GIIM Feature: gene Location: 83-1327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287-941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287-941 bp Feature: domain Description: GIIM Note: maturase Location: 1022-1241 bp Feature: domain Description: GIIM Note: maturase Location: 1022-1241 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BAWM01000070.1 Bacillus niacini DNA, contig: Contig70, whole genome shotgun sequence (1287 bp)
Overview 1 RT 1: 2-1279 bp Neighborhood of RT #1 [2, 1284] ligB RVT-GII Feature: gene Location: 2-235 bp Feature: gene Location: 423-569 bp Feature: domain Description: ligB Location: 426-540 bp Feature: domain Description: ligB Location: 426 -540 bp Feature: gene Location: 736-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 877-1279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 877-1279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ligB (PRK08097), RVT-GII

Seq: BAWM01000068.1 Bacillus niacini DNA, contig: Contig68, whole genome shotgun sequence (2506 bp)
Overview 1 RT 1: 143-1814 bp Neighborhood of RT #1 [143, 1909] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 143-1909 bp Feature: domain Description: RVT_N Location: 191-437 bp Feature: domain Description: RVT_N Location: 191-437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491-1145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491-1145 bp Feature: domain Description: GIIM Note: maturase Location: 1208-1442 bp Feature: domain Description: GIIM Note: maturase Location: 1208-1442 bp Feature: domain Description: HNHc Note: nucleases Location: 1643-1814 bp Feature: domain Description: HNHc Note: nucleases Location: 1643-1814 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: BAWM01000061.1 Bacillus niacini DNA, contig: Contig61, whole genome shotgun sequence (298 bp)
Overview 1 RT 1: 2-296 bp Neighborhood of RT #1 [2, 295] RVT-GII Feature: gene Location: 2-295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8 -296 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: BAWM01000060.1 Bacillus niacini DNA, contig: Contig60, whole genome shotgun sequence (441 bp)
Overview 1 RT 1: 1-316 bp Neighborhood of RT #1 [1, 438] RVT-GII Feature: gene Location: 1-438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: BAWM01000055.1 Bacillus niacini DNA, contig: Contig55, whole genome shotgun sequence (719 bp)
Overview 1 RT 1: 1-709 bp Neighborhood of RT #1 [1, 717] RVT-GII Feature: gene Location: 1-717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: BAWM01000048.1 Bacillus niacini DNA, contig: Contig48, whole genome shotgun sequence (1608 bp)
Overview 1 RT 1: 167-1403 bp Neighborhood of RT #1 [167, 1459] RVT-GII GIIM Feature: gene Location: 167-1459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1094 bp Feature: domain Description: GIIM Note: maturase Location: 1181-1403 bp Feature: domain Description: GIIM Note: maturase Location: 11 81-1403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BAWM01000033.1 Bacillus niacini DNA, contig: Contig33, whole genome shotgun sequence (633 bp)
Overview 1 RT 1: 98-626 bp Neighborhood of RT #1 [98, 631] RVT-GII Feature: gene Location: 98-631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 353-626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 353-626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: BAWM01000028.1 Bacillus niacini DNA, contig: Contig28, whole genome shotgun sequence (2065 bp)
Overview 1 RT 1: 199-1873 bp Neighborhood of RT #1 [199, 1968] RVT-GII GIIM Feature: gene Location: 199-366 bp Feature: gene Location: 709-1968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 940-1564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 940-1564 bp Feature: domain Description: GIIM Note: maturase Location: 1660-1873 bp Feature: domain Description: GIIM Note: maturase Location: 1660-1873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BAWM01000025.1 Bacillus niacini DNA, contig: Contig25, whole genome shotgun sequence (663 bp)
Overview 1 RT 1: 3-429 bp Neighborhood of RT #1 [3, 587] RVT-GII GIIM Feature: gene Location: 3-587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-150 bp Feature: domain Description: GIIM Note: maturase Location: 195-429 bp Feature: domain Description: GIIM Note: maturase Location: 195-429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BAWM01000021.1 Bacillus niacini DNA, contig: Contig21, whole genome shotgun sequence (289949 bp)
Overview 1 RT 1: 109063-113991 bp Neighborhood of RT #1 [109063, 114032] AAA_22 RVT-UG2 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 Feature: gene Location: 109063-109515 bp Feature: domain Description: AAA_22 Location: 109186-109468 bp Feature: domain Description: AAA_22 Location: 109186-109468 bp Feature: gene Location: 109613-109768 bp Feature: gene Location: 109882-111264 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 110143-110977 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 110143-110977 bp Feature: gene Location: 112117-112278 bp Feature: gene Location: 112293-114032 bp Feature: domain Description: DUF4379 Location: 112332-112491 bp Feature: domain Description: DUF4379 Location: 112332-112491 bp Feature: domain Description: DUF4379 Location: 112530-112692 bp Feature: domain Description: DUF4379 Location: 112530-112692 bp Feature: domain Description: DUF4379 Location: 112740-112905 bp Feature: domain Description: DUF4379 Location: 112740-112905 bp Feature: domain Description: DUF4379 Location: 113409-113562 bp Feature: domain Description: DUF4379 Location: 113409-113562 bp Feature: domain Description: DUF4379 Location: 113610-113769 bp Feature: domain Description: DUF4379 Location: 113610-113769 bp Feature: domain Description: DUF4379 Location: 113817-113991 bp Feature: domain Description: DUF4379 Location: 113817-113991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_22 (pfam13401), RVT-UG2, DUF4379 (pfam14311)