myRT

myRT report for GCA_000763385.1_ASM76338v1

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Seq: JQFA01000002.1 Leptolyngbya sp. KIOST-1 LS_contig_2, whole genome shotgun sequence (3842158 bp)
Overview 1 RT 1: 746766-750583 bp 2 RT 2: 3005982-3013175 bp 3 RT 3: 3250716-3256820 bp Neighborhood of RT #1 [746766, 750594] LbH_gamma_CA RuBisCO_small_like PRK07812 RVT-GII GIIM DDE_Tnp_ISAZ013 Neighborhood of RT #2 [3005982, 3013175] RVT-GII GIIM PrtC DUF3656 PrtC Neighborhood of RT #3 [3250716, 3256820] COG1233 RVT-GII RVT-GII RVT-GII RVT-GII RVT-GII RVT-GII RVT-GII RVT-GII gag-asp_proteas Feature: gene Location: 746766-747356 bp Feature: domain Description: LbH_gamma_CA Location: 746859-747006 bp Feature: domain Description: LbH_gamma_CA Location: 746859-747006 bp Feature: domain Description: RuBisCO_small_like Location: 747123-747351 bp Feature: domain Description: RuBisCO_small_like Location: 7471 23-747351 bp Feature: gene Location: 747864-748283 bp Feature: domain Description: PRK07812 Location: 748029-748224 bp Feature: domain Description: PRK0781 2 Location: 748029-748224 bp Feature: gene Location: 748620-749849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 748764-749385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 748764-749385 bp Feature: domain Description: GIIM Note: maturase Location: 749430-749631 bp Feature: domain Description: GIIM Note: maturase Location: 749430-749631 bp Feature: gene Location: 749996-750145 bp Feature: gene Location: 750070-750594 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 750367-750583 bp Feature: domain Description: DDE_Tnp_ISAZ01 3 Location: 750367-750583 bp Feature: gene Location: 3005982-3006428 bp Feature: gene Location: 3006548-3006964 bp Feature: gene Location: 3008833-3009663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3008836-3009199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3008836-30091 99 bp Feature: domain Description: GIIM Note: maturase Location: 3009244-3009445 bp Feature: domain Description: GIIM Note: maturase Location: 3009244-3009445 bp Feature: gene Location: 3009958-3012630 bp Feature: domain Description: PrtC Location: 3010024-3010843 bp Feature: domain Description: PrtC Location: 301 0024-301 0843 bp Feature: domain Description: DUF3656 Location: 3011320-3011677 bp Feature: domain Description: DUF3656 Location: 301 1 320-301 1 677 bp Feature: domain Description: PrtC Location: 3012049-3012532 bp Feature: domain Description: PrtC Location: 301 2049-301 2532 bp Feature: gene Location: 3012702-3013175 bp Feature: gene Location: 3250716-3252230 bp Feature: domain Description: COG1233 Location: 3250728-3252201 bp Feature: domain Description: COG1 233 Location: 3250728-3252201 bp Feature: gene Location: 3252976-3253122 bp Feature: gene Location: 3253061-3253741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3253340-3253697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3253340-3253697 bp Feature: gene Location: 3253720-3254091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3253723-3254047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3253723-3254047 bp Feature: gene Location: 3254070-3254441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3254073-3254397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3254073-3254397 bp Feature: gene Location: 3254420-3254791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3254423-3254747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3254423-3254747 bp Feature: gene Location: 3254770-3255141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3254773-3255097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3254773-3255097 bp Feature: gene Location: 3255120-3255491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3255123-3255447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32551 23-3255447 bp Feature: gene Location: 3255470-3255841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3255473-3255797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3255473-3255797 bp Feature: gene Location: 3255820-3256104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3255823-3256090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3255823-3256090 bp Feature: gene Location: 3256198-3256605 bp Feature: domain Description: gag-asp_proteas Location: 3256309-3256531 bp Feature: domain Description: gag-asp_proteas Location: 3256309-3256531 bp Feature: gene Location: 3256611-3256820 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LbH_gamma_CA (cd00710), RuBisCO_small_like (cl01843), PRK07812 (O-acetylhomoserine aminocarboxypropyltransferase; Validated), RVT-GII, GIIM (pfam08388), DDE_Tnp_ISAZ013 (pfam07592), PrtC (COG0826), DUF3656 (pfam12392), COG1233 (Phytoene dehydrogenase-related protein ), gag-asp_proteas (pfam13975)

Seq: JQFA01000004.1 Leptolyngbya sp. KIOST-1 LS_contig_4, whole genome shotgun sequence (2106336 bp)
Overview 1 RT 1: 1148958-1154255 bp Neighborhood of RT #1 [1148958, 1154255] 23S_rRNA_IVP Cas2_I_II_III RVT-CRISPR Cas1_I-II-III HTH_XRE AAA_22 Feature: gene Location: 1148958-1149377 bp Feature: domain Description: 23S_rRNA_IVP Location: 1148985-1149285 bp Feature: domain Description: 2 3S_rRNA_IVP Location: 1148985-11492 85 bp Feature: gene Location: 1149392-1149670 bp Feature: domain Description: Cas2_I_II_III Location: 1149401-1149629 bp Feature: domain Description: Cas2 _I_II_III Location: 1149401-114962 9 bp Feature: gene Location: 1149670-1151637 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1149859-1150468 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1149859-1150468 bp Feature: domain Description: Cas1_I-II-III Location: 1150642-1151599 bp Feature: domain Description: Cas1_I-II-III Location: 1150642 -1151599 bp Feature: gene Location: 1151956-1153395 bp Feature: domain Description: HTH_XRE Location: 1152031-1152163 bp Feature: domain Description: HTH_XRE Location: 1152 031-1152 163 bp Feature: domain Description: AAA_22 Location: 1152325-1152613 bp Feature: domain Description: AAA_2 2 Location: 1152 32 5-1152 613 bp Feature: gene Location: 1153482-1154255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 23S_rRNA_IVP (pfam05635), Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), HTH_XRE (smart00530), AAA_22 (pfam13401)