myRT

myRT report for GCA_000764085.1_Bm14581-Illumina

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Seq: JJMH01000004.1 Bacillus megaterium NBRC 15308 = ATCC 14581 Cont4, whole genome shotgun sequence (11119 bp)
Overview 1 RT 1: 6230-9292 bp Neighborhood of RT #1 [6230, 9292] RVT-GII Intron_maturas2 HNHc TraG-D_C Feature: gene Location: 6230-8044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6494-7322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6494-7322 bp Feature: domain Description: Intron_maturas2 Location: 7400-7694 bp Feature: domain Description: Intron_maturas2 Location: 7400-7694 bp Feature: domain Description: HNHc Note: nucleases Location: 7841-8015 bp Feature: domain Description: HNHc Note: nucleases Location: 7841 -801 5 bp Feature: gene Location: 8152-9060 bp Feature: domain Description: TraG-D_C Location: 8161-8473 bp Feature: domain Description: TraG-D_C Location: 81 61 -8473 bp Feature: gene Location: 9086-9292 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696)

Seq: JJMH01000012.1 Bacillus megaterium NBRC 15308 = ATCC 14581 Cont12, whole genome shotgun sequence (91043 bp)
Overview 1 RT 1: 56625-64878 bp Neighborhood of RT #1 [56625, 65114] GAT1_cyanophycinase GAT1_cyanophycinase RocR RVT-GII Intron_maturas2 HNHc RocR GAT1_cyanophycinase Feature: gene Location: 56625-59177 bp Feature: domain Description: GAT1_cyanophycinase Location: 56736-57513 bp Feature: domain Description: GAT1_cyanophycinase Location: 56736-57513 bp Feature: domain Description: GAT1_cyanophycinase Location: 58017-58767 bp Feature: domain Description: GAT1_cyanophycinase Location: 58017-58767 bp Feature: gene Location: 59390-60763 bp Feature: domain Description: RocR Location: 59981-60704 bp Feature: domain Description: RocR Location: 59981-60704 bp Feature: gene Location: 61313-63127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61577-62405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61577-62 405 bp Feature: domain Description: Intron_maturas2 Location: 62483-62777 bp Feature: domain Description: Intron_maturas2 Location: 62 483-62 777 bp Feature: domain Description: HNHc Note: nucleases Location: 62924-63098 bp Feature: domain Description: HNHc Note: nucleases Location: 62 92 4-63098 bp Feature: gene Location: 63268-63963 bp Feature: domain Description: RocR Location: 63271-63778 bp Feature: domain Description: RocR Location: 632 71-63778 bp Feature: gene Location: 64038-65114 bp Feature: domain Description: GAT1_cyanophycinase Location: 64209-64878 bp Feature: domain Description: GAT1_cyanophycinase Location: 642 09-64878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GAT1_cyanophycinase (cd03145), RocR (COG3829), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: JJMH01000030.1 Bacillus megaterium NBRC 15308 = ATCC 14581 Cont32, whole genome shotgun sequence (126849 bp)
Overview 1 RT 1: 108972-113679 bp Neighborhood of RT #1 [108972, 113876] HU RVT_N RVT-GII GIIM PadR DUF2812 Feature: gene Location: 108972-109244 bp Feature: domain Description: HU Location: 108978-109233 bp Feature: domain Description: HU Location: 108978-10923 3 bp Feature: gene Location: 109666-109884 bp Feature: gene Location: 110592-112241 bp Feature: RT Description: RVT_N Location: 110640-110886 bp Feature: RT Description: RVT_N Location: 110640-110886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110940-111600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110940-111600 bp Feature: domain Description: GIIM Note: maturase Location: 111669-111900 bp Feature: domain Description: GIIM Note: maturase Location: 111669-111900 bp Feature: gene Location: 113000-113335 bp Feature: domain Description: PadR Location: 113051-113309 bp Feature: domain Description: PadR Location: 113 051-113 3 09 bp Feature: gene Location: 113337-113876 bp Feature: domain Description: DUF2812 Location: 113388-113679 bp Feature: domain Description: DUF2812 Location: 113 3 88-113 679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HU (cd13831), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PadR (pfam03551), DUF2812 (pfam11193)