myRT

myRT report for GCA_000765165.1_ASM76516v1

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Seq: JMFY01000029.1 Clostridium sp. HMP27 Clostridium-HMP27_contig_29, whole genome shotgun sequence (73508 bp)
Overview 1 RT 1: 39652-45045 bp Neighborhood of RT #1 [39652, 45476] Macro_Appr_pase_like Macro_Appr_pase_like COG4185 RVT-GII GIIM COG3862 FadH2 Feature: gene Location: 39652-40287 bp Feature: domain Description: Macro_Appr_pase_like Location: 39661-39973 bp Feature: domain Description: Macro_Appr_pase_like Location: 39661 -39973 bp Feature: domain Description: Macro_Appr_pase_like Location: 40069-40279 bp Feature: domain Description: Macro_Appr_pase_like Location: 40069-40279 bp Feature: gene Location: 41022-41600 bp Feature: domain Description: COG4185 Location: 41025-41580 bp Feature: domain Description: COG41 85 Location: 41 025-41 580 bp Feature: gene Location: 41949-43358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42294-42912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42294-4291 2 bp Feature: domain Description: GIIM Note: maturase Location: 42963-43194 bp Feature: domain Description: GIIM Note: maturase Location: 42963-431 94 bp Feature: gene Location: 43853-44209 bp Feature: domain Description: COG3862 Location: 43856-44198 bp Feature: domain Description: COG3862 Location: 43856-441 98 bp Feature: gene Location: 44214-45476 bp Feature: domain Description: FadH2 Location: 44229-45045 bp Feature: domain Description: FadH2 Location: 44229-45045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Macro_Appr_pase_like, COG4185 (Predicted ABC-type ATPase ), RVT-GII, GIIM (pfam08388), COG3862 (Uncharacterized protein with two CxxC motifs ), FadH2 (COG0446)

Seq: JMFY01000017.1 Clostridium sp. HMP27 Clostridium-HMP27_contig_17, whole genome shotgun sequence (263331 bp)
Overview 1 RT 1: 233805-237428 bp Neighborhood of RT #1 [233805, 237481] FGE-sulfatase Avd_like RVT-DGRs HTH_26 PHA02414 Feature: gene Location: 233805-234965 bp Feature: domain Description: FGE-sulfatase Location: 234063-234435 bp Feature: domain Description: FGE-sulfatase Location: 2 34063-2 34435 bp Feature: gene Location: 235082-235417 bp Feature: domain Description: Avd_like Location: 235100-235406 bp Feature: domain Description: Avd_like Location: 2 35100-2 35406 bp Feature: gene Location: 235714-236799 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 235927-236650 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 3592 7-2 36650 bp Feature: gene Location: 236899-237123 bp Feature: domain Description: HTH_26 Location: 236914-237097 bp Feature: domain Description: HTH_2 6 Location: 2 36914-2 37097 bp Feature: gene Location: 237173-237481 bp Feature: domain Description: PHA02414 Location: 237194-237428 bp Feature: domain Description: PHA02 414 Location: 2 37194-2 3742 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FGE-sulfatase (pfam03781), Avd_like (cd16376), RVT-DGRs, HTH_26 (pfam13443), PHA02414 (hypothetical protein)