myRT

myRT report for GCA_000766035.1_ASM76603v1

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Seq: JRAC01000003.1 Helicobacter pylori strain Manado-1 Manado-1_contig3, whole genome shotgun sequence (234438 bp)
Overview 1 RT 1: 148055-155313 bp Neighborhood of RT #1 [148055, 155372] YeeA YeeA RVT-UG15 DUF4065 DUF2207 Feature: gene Location: 148055-151855 bp Feature: domain Description: YeeA Location: 149300-150269 bp Feature: domain Description: YeeA Location: 1 49300-1 50269 bp Feature: domain Description: YeeA Location: 150398-151838 bp Feature: domain Description: YeeA Location: 1 50398-1 51 838 bp Feature: gene Location: 151856-152365 bp Feature: gene Location: 152397-154016 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 152895-153306 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 1 52895-1 53306 bp Feature: gene Location: 154242-154679 bp Feature: domain Description: DUF4065 Location: 154314-154596 bp Feature: domain Description: DUF4065 Location: 1 5431 4-1 54596 bp Feature: gene Location: 154866-155372 bp Feature: domain Description: DUF2207 Location: 154926-155313 bp Feature: domain Description: DUF2207 Location: 1 54926-1 5531 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeA (COG1002), RVT-UG15, DUF4065 (pfam13274), DUF2207 (pfam09972)

Seq: JRAC01000006.1 Helicobacter pylori strain Manado-1 Manado-1_contig6, whole genome shotgun sequence (408900 bp)
Overview 1 RT 1: 112843-117430 bp Neighborhood of RT #1 [112843, 117549] recJ RluA RVT-GII YsdA Feature: gene Location: 112843-114393 bp Feature: domain Description: recJ Location: 112894-114382 bp Feature: domain Description: recJ Location: 112 894-114382 bp Feature: gene Location: 114393-115274 bp Feature: domain Description: RluA Location: 114471-115242 bp Feature: domain Description: RluA Location: 114471-1152 42 bp Feature: gene Location: 115318-116388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116125-116245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11612 5-1162 45 bp Feature: gene Location: 116378-117163 bp Feature: gene Location: 117163-117549 bp Feature: domain Description: YsdA Location: 117166-117430 bp Feature: domain Description: YsdA Location: 117166-117430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT recJ (TIGR00644), RluA (COG0564), RVT-GII, YsdA (COG3326)