myRT

myRT report for GCA_000766125.1_ASM76612v1

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Seq: JQSE01000096.1 (5987 bp)
Overview 1 RT 1: 2704-5984 bp Neighborhood of RT #1 [2704, 5986] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 2704-2988 bp Feature: domain Description: InsE Location: 2716-2977 bp Feature: domain Description: InsE Location: 271 6-2977 bp Feature: gene Location: 3036-3455 bp Feature: domain Description: PHA02517 Location: 3051-3390 bp Feature: domain Description: PHA0251 7 Location: 3051 -3390 bp Feature: gene Location: 4047-5570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4320-5052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4320-5052 bp Feature: domain Description: GIIM Note: maturase Location: 5127-5325 bp Feature: domain Description: GIIM Note: maturase Location: 51 27-5325 bp Feature: gene Location: 5693-5986 bp Feature: domain Description: PHA02517 Location: 5696-5984 bp Feature: domain Description: PHA0251 7 Location: 5696-5984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JQSE01000024.1 (69850 bp)
Overview 1 RT 1: 5457-12559 bp Neighborhood of RT #1 [5457, 12559] HTH_23 Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 5457-5933 bp Feature: domain Description: HTH_23 Location: 5535-5676 bp Feature: domain Description: HTH_2 3 Location: 5535-5676 bp Feature: gene Location: 6106-7224 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 6877-7048 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 6877-7048 bp Feature: gene Location: 7880-8980 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8063-8591 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8063-8591 bp Feature: gene Location: 9095-11341 bp Feature: domain Description: AAA_15 Location: 9098-10106 bp Feature: domain Description: AAA_15 Location: 9098-10106 bp Feature: gene Location: 12254-12559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)