myRT

myRT report for GCA_000767305.1_ASM76730v1

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Seq: JRKG01000049.1 Pseudoalteromonas sp. PLSV NODE_108, whole genome shotgun sequence (446548 bp)
Overview 1 RT 1: 291353-298509 bp Neighborhood of RT #1 [291353, 298550] COG0610 RVT-Retrons TnpB_IS66 Feature: gene Location: 291353-292183 bp Feature: gene Location: 292176-295436 bp Feature: domain Description: COG0610 Location: 292638-295233 bp Feature: domain Description: COG061 0 Location: 292638-295233 bp Feature: gene Location: 295648-297516 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 295795-296512 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 295795-29651 2 bp Feature: gene Location: 297883-298203 bp Feature: gene Location: 298200-298550 bp Feature: domain Description: TnpB_IS66 Location: 298227-298509 bp Feature: domain Description: TnpB_IS66 Location: 298227-298509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-Retrons, TnpB_IS66 (pfam05717)

Seq: JRKG01000011.1 Pseudoalteromonas sp. PLSV NODE_12, whole genome shotgun sequence (128186 bp)
Overview 1 RT 1: 94574-100693 bp Neighborhood of RT #1 [94574, 100693] Glyco_hydro_127 RVT-GII GIIM Feature: gene Location: 94574-96553 bp Feature: domain Description: Glyco_hydro_127 Location: 94667-96278 bp Feature: domain Description: Glyco_hydro_12 7 Location: 94667-962 78 bp Feature: gene Location: 97192-97755 bp Feature: gene Location: 97834-98946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97891-98509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97891-98509 bp Feature: domain Description: GIIM Note: maturase Location: 98554-98767 bp Feature: domain Description: GIIM Note: maturase Location: 98554-98767 bp Feature: gene Location: 99233-100216 bp Feature: gene Location: 100457-100693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_hydro_127 (pfam07944), RVT-GII, GIIM (pfam08388)