myRT

myRT report for GCA_000768655.1_CCUG7971_1.0

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Seq: JDRZ01000111.1 Clostridium botulinum D str. CCUG 7971 p2Cb7971_5, whole genome shotgun sequence (10378 bp)
Overview 1 RT 1: 764-6400 bp Neighborhood of RT #1 [764, 6534] XRE RVT-GII HNHc DUF3887 YhfC Feature: gene Location: 764-976 bp Feature: domain Description: XRE Location: 785-971 bp Feature: domain Description: XRE Location: 785-971 bp Feature: gene Location: 973-1290 bp Feature: gene Location: 1694-3529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2012-2732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 2-2732 bp Feature: domain Description: HNHc Note: nucleases Location: 3314-3407 bp Feature: domain Description: HNHc Note: nucleases Location: 331 4-3407 bp Feature: gene Location: 5400-5795 bp Feature: domain Description: DUF3887 Location: 5520-5784 bp Feature: domain Description: DUF3887 Location: 5520-5784 bp Feature: gene Location: 5773-6534 bp Feature: domain Description: YhfC Location: 5833-6400 bp Feature: domain Description: YhfC Location: 5833-6400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), DUF3887 (pfam13026), YhfC (COG4377)

Seq: JDRZ01000108.1 Clostridium botulinum D str. CCUG 7971 p2Cb7971_2, whole genome shotgun sequence (28104 bp)
Overview 1 RT 1: 18758-24394 bp Neighborhood of RT #1 [18758, 24528] XRE RVT-GII HNHc DUF3887 YhfC Feature: gene Location: 18758-18970 bp Feature: domain Description: XRE Location: 18779-18965 bp Feature: domain Description: XRE Location: 18779-18965 bp Feature: gene Location: 18967-19284 bp Feature: gene Location: 19688-21523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20006-20726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0006-2 072 6 bp Feature: domain Description: HNHc Note: nucleases Location: 21308-21401 bp Feature: domain Description: HNHc Note: nucleases Location: 2 1308-2 1401 bp Feature: gene Location: 23394-23789 bp Feature: domain Description: DUF3887 Location: 23514-23778 bp Feature: domain Description: DUF3887 Location: 2 3514-2 3778 bp Feature: gene Location: 23767-24528 bp Feature: domain Description: YhfC Location: 23827-24394 bp Feature: domain Description: YhfC Location: 2 382 7-2 4394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XRE (COG1476), RVT-GII, HNHc (smart00507), DUF3887 (pfam13026), YhfC (COG4377)