myRT

myRT report for GCA_000768785.1_ASM76878v1

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Seq: JRAI01000061.1 Porphyromonas gulae strain COT-052 OH1451 contig_61, whole genome shotgun sequence (59851 bp)
Overview 1 RT 1: 22830-25282 bp Neighborhood of RT #1 [22830, 25329] COG1373 RVT-UG5 Feature: gene Location: 22830-23033 bp Feature: gene Location: 23027-24373 bp Ori: KGN85075.1 Feature: domain Description: COG1373 Location: 23069-24302 bp Feature: domain Description: COG1 373 Location: 23069-24302 bp Feature: gene Location: 24388-25329 bp Ori: KGN85076.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24838-25282 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24838-25282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-UG5

Seq: JRAI01000055.1 Porphyromonas gulae strain COT-052 OH1451 contig_55, whole genome shotgun sequence (46861 bp)
Overview 1 RT 1: 12519-17111 bp Neighborhood of RT #1 [12519, 17185] Cas2_I_II_III CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III Cmr6_III-B cas_Cmr5 Feature: gene Location: 12519-12809 bp Ori: KGN85429.1 Feature: domain Description: Cas2_I_II_III Location: 12540-12759 bp Feature: domain Description: Cas2 _I_II_III Location: 12 540-12 759 bp Feature: gene Location: 12829-15924 bp Ori: KGN85430.1 Feature: domain Description: CRISPR_Cas6 Location: 13363-13717 bp Feature: domain Description: CRISPR_Cas6 Location: 13363-13717 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 13867-14479 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 13867-14479 bp Feature: domain Description: Cas1_I-II-III Location: 14929-15883 bp Feature: domain Description: Cas1_I-II-III Location: 1492 9-15883 bp Feature: gene Location: 15987-16745 bp Ori: KGN85431.1 Feature: domain Description: Cmr6_III-B Location: 16065-16734 bp Feature: domain Description: Cmr6_III-B Location: 16065-16734 bp Feature: gene Location: 16742-17185 bp Ori: KGN85432.1 Feature: domain Description: cas_Cmr5 Location: 16781-17111 bp Feature: domain Description: cas_Cmr5 Location: 16781-17111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), cas_Cmr5 (TIGR01881)