myRT

myRT report for GCA_000769095.1_ASM76909v1

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Seq: JRFD01000052.1 Porphyromonas gulae strain COT-052 OH2857 contig_52, whole genome shotgun sequence (78081 bp)
Overview 1 RT 1: 74008-77578 bp Neighborhood of RT #1 [74008, 77964] TauB TauC RVT_N RVT-GII GIIM Feature: gene Location: 74008-74742 bp Ori: KGN86996.1 Feature: domain Description: TauB Location: 74011-74731 bp Feature: domain Description: TauB Location: 7401 1 -74731 bp Feature: gene Location: 74715-75491 bp Ori: KGN86997.1 Feature: domain Description: TauC Location: 74727-75459 bp Feature: domain Description: TauC Location: 74727-75459 bp Feature: gene Location: 76297-77964 bp Ori: KGN86998.1 Feature: domain Description: RVT_N Location: 76354-76597 bp Feature: domain Description: RVT_N Location: 76354-76597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76642-77290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76642-77290 bp Feature: domain Description: GIIM Note: maturase Location: 77347-77578 bp Feature: domain Description: GIIM Note: maturase Location: 77347-77578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TauB (COG4525), TauC (COG0600), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JRFD01000023.1 Porphyromonas gulae strain COT-052 OH2857 contig_23, whole genome shotgun sequence (93662 bp)
Overview 1 RT 1: 27939-32614 bp Neighborhood of RT #1 [27939, 32673] Cmr5_III-B Cmr6_III-B CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 27939-28448 bp Ori: KGN89240.1 Feature: domain Description: Cmr5_III-B Location: 28059-28230 bp Feature: domain Description: Cmr5_III-B Location: 2 8059-2 82 30 bp Feature: gene Location: 28445-29203 bp Ori: KGN89241.1 Feature: domain Description: Cmr6_III-B Location: 28523-29192 bp Feature: domain Description: Cmr6_III-B Location: 2 852 3-2 9192 bp Feature: gene Location: 29265-32363 bp Ori: KGN89242.1 Feature: domain Description: CRISPR_Cas6 Location: 29799-30153 bp Feature: domain Description: CRISPR_Cas6 Location: 2 9799-30153 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 30303-30915 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 30303-30915 bp Feature: domain Description: Cas1_I-II-III Location: 31365-32322 bp Feature: domain Description: Cas1_I-II-III Location: 31365-32 32 2 bp Feature: gene Location: 32383-32673 bp Ori: KGN89243.1 Feature: domain Description: Cas2_I_II_III Location: 32404-32614 bp Feature: domain Description: Cas2 _I_II_III Location: 32 404-32 614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cmr5_III-B (cl01317), Cmr6_III-B (cd09661), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)