myRT

myRT report for GCA_000770015.1_ASM77001v1

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Seq: JQCV01000005.1 Alcaligenes faecalis strain MOR02 contig5, whole genome shotgun sequence (272393 bp)
Overview 1 RT 1: 88231-98166 bp Neighborhood of RT #1 [88231, 98166] YbjD UvrD UvrD UvrD RVT_N RVT-GII GIIM HNHc Feature: gene Location: 88231-89979 bp Feature: domain Description: YbjD Location: 88234-89890 bp Feature: domain Description: YbjD Location: 88234-89890 bp Feature: gene Location: 89976-91715 bp Feature: domain Description: UvrD Location: 89991-90258 bp Feature: domain Description: UvrD Location: 89991 -90258 bp Feature: domain Description: UvrD Location: 90498-90909 bp Feature: domain Description: UvrD Location: 90498-90909 bp Feature: domain Description: UvrD Location: 91458-91638 bp Feature: domain Description: UvrD Location: 91 458-91 638 bp Feature: gene Location: 93620-95338 bp Feature: RT Description: RVT_N Location: 93677-93914 bp Feature: RT Description: RVT_N Location: 93677-9391 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93965-94616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93965-9461 6 bp Feature: domain Description: GIIM Note: maturase Location: 94670-94901 bp Feature: domain Description: GIIM Note: maturase Location: 94670-94901 bp Feature: domain Description: HNHc Note: nucleases Location: 95135-95291 bp Feature: domain Description: HNHc Note: nucleases Location: 951 35-95291 bp Feature: gene Location: 97117-97743 bp Feature: gene Location: 97825-98166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjD (COG3593), UvrD (COG0210), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)