myRT

myRT report for GCA_000772965.1_ASM77296v1

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Seq: JPVQ01000128.1 Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 contig121, whole genome shotgun sequence (735 bp)
Overview 1 RT 1: 1-730 bp Neighborhood of RT #1 [1, 735] RVT-GII GIIM Feature: gene Location: 1-735 bp Ori: KGR77972.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-469 bp Feature: domain Description: GIIM Note: maturase Location: 526-730 bp Feature: domain Description: GIIM Note: maturase Location: 526-730 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JPVQ01000115.1 Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 contig124, whole genome shotgun sequence (1111 bp)
Overview 1 RT 1: 1-1075 bp Neighborhood of RT #1 [1, 1075] RVT-GII GIIM Feature: gene Location: 1-1075 bp Ori: KGR79457.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202-817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 02 -817 bp Feature: domain Description: GIIM Note: maturase Location: 877-1075 bp Feature: domain Description: GIIM Note: maturase Location: 877-1075 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JPVQ01000004.1 Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 contig4, whole genome shotgun sequence (142610 bp)
Overview 1 RT 1: 99605-105232 bp Neighborhood of RT #1 [99605, 105276] PRK06352 MFS_SV2_like RVT-GII GIIM RpiR Feature: gene Location: 99605-100657 bp Ori: KGR91797.1 Feature: domain Description: PRK06352 Location: 99608-100625 bp Feature: domain Description: PRK063 52 Location: 99608-100625 bp Feature: gene Location: 101031-102260 bp Ori: KGR91798.1 Feature: domain Description: MFS_SV2_like Location: 101082-102219 bp Feature: domain Description: MFS_SV2_like Location: 101082-102219 bp Feature: gene Location: 102840-103754 bp Ori: KGR91799.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103065-103683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 065-103 683 bp Feature: gene Location: 103775-104131 bp Ori: KGR91800.1 Feature: domain Description: GIIM Note: maturase Location: 103790-103970 bp Feature: domain Description: GIIM Note: maturase Location: 103 790-103 970 bp Feature: gene Location: 104416-105276 bp Ori: KGR91801.1 Feature: domain Description: RpiR Location: 104419-105232 bp Feature: domain Description: RpiR Location: 104419-10523 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06352 (threonine synthase; Validated), MFS_SV2_like (cd17316), RVT-GII, GIIM (pfam08388), RpiR (COG1737)

Seq: JPVQ01000019.1 Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 contig21, whole genome shotgun sequence (72525 bp)
Overview 1 RT 1: 21330-29581 bp Neighborhood of RT #1 [21330, 29598] PRK13922 PRK13927 RVT-GII Intron_maturas2 HNHc Maf FolC Feature: gene Location: 21330-22220 bp Ori: KGR90433.1 Feature: domain Description: PRK13922 Location: 21342-22158 bp Feature: domain Description: PRK13922 Location: 2134 2-22158 bp Feature: gene Location: 22233-23252 bp Ori: KGR90434.1 Feature: domain Description: PRK13927 Location: 22245-23238 bp Feature: domain Description: PRK13927 Location: 2224 5-23238 bp Feature: gene Location: 23823-25706 bp Ori: KGR90435.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24087-24927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24 087-24 927 bp Feature: domain Description: Intron_maturas2 Location: 25038-25290 bp Feature: domain Description: Intron_maturas2 Location: 25038-25290 bp Feature: domain Description: HNHc Note: nucleases Location: 25488-25650 bp Feature: domain Description: HNHc Note: nucleases Location: 254 88-25650 bp Feature: gene Location: 26852-27439 bp Ori: KGR90436.1 Feature: domain Description: Maf Location: 26870-27425 bp Feature: domain Description: Maf Location: 26870-274 25 bp Feature: gene Location: 28345-29598 bp Ori: KGR90437.1 Feature: domain Description: FolC Location: 28396-29581 bp Feature: domain Description: FolC Location: 28396-29581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13922 (rod shape-determining protein MreC; Provisional), PRK13927 (rod shape-determining protein MreB; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Maf (pfam02545), FolC (COG0285)

Seq: JPVQ01000136.1 Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 contig120, whole genome shotgun sequence (575 bp)
Overview 1 RT 1: 160-565 bp Neighborhood of RT #1 [160, 575] RVT-GII Feature: gene Location: 160-575 bp Ori: KGR77287.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 478-565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 478-5 65 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JPVQ01000034.1 Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 contig43, whole genome shotgun sequence (37932 bp)
Overview 1 RT 1: 6563-10823 bp Neighborhood of RT #1 [6563, 10909] 2a45 HTH_ARSR RVT-GII GIIM Feature: gene Location: 6563-7858 bp Ori: KGR89777.1 Feature: domain Description: 2a45 Location: 6578-7853 bp Feature: domain Description: 2a45 Location: 6 578-7853 bp Feature: gene Location: 7873-8217 bp Ori: KGR89778.1 Feature: domain Description: HTH_ARSR Location: 7918-8143 bp Feature: domain Description: HTH_ARSR Location: 7918-8143 bp Feature: gene Location: 9665-10909 bp Ori: KGR89779.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9869-10523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 986 9-10523 bp Feature: domain Description: GIIM Note: maturase Location: 10604-10823 bp Feature: domain Description: GIIM Note: maturase Location: 106 04-10823 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 2a45 (TIGR00935), HTH_ARSR (smart00418), RVT-GII, GIIM (pfam08388)