myRT

myRT report for GCA_000773055.1_BzhMx1.0

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Seq: JSBM01000076.1 Caballeronia zhejiangensis strain CEIB S4-3 contig_33, whole genome shotgun sequence (71210 bp)
Overview 1 RT 1: 56949-61741 bp Neighborhood of RT #1 [56949, 61746] PRK15041 RVT-Retrons Dabb Feature: gene Location: 56949-57245 bp Feature: gene Location: 57259-58983 bp Feature: domain Description: PRK15041 Location: 57799-58894 bp Feature: domain Description: PRK1 5041 Location: 57799-58894 bp Feature: gene Location: 59443-61194 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 59596-60205 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 59596-60205 bp Feature: gene Location: 61215-61379 bp Feature: gene Location: 61444-61746 bp Feature: domain Description: Dabb Location: 61450-61741 bp Feature: domain Description: Dabb Location: 61 450-61 741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15041 (methyl-accepting chemotaxis protein), RVT-Retrons, Dabb (smart00886)

Seq: JSBM01000035.1 Caballeronia zhejiangensis strain CEIB S4-3 contig_53, whole genome shotgun sequence (34666 bp)
Overview 1 RT 1: 11358-15725 bp Neighborhood of RT #1 [11358, 15814] PDC_hydrolase RVT-GII RVT-GII GIIM sensory_box sensory_box sensory_box Feature: gene Location: 11358-12212 bp Feature: domain Description: PDC_hydrolase Location: 11547-12210 bp Feature: domain Description: PDC_hydrolase Location: 11547-12 2 10 bp Feature: gene Location: 12377-12538 bp Feature: gene Location: 13223-13543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13385-13505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13385-13505 bp Feature: gene Location: 13135-14403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13483-14047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13483-14047 bp Feature: domain Description: GIIM Note: maturase Location: 14116-14329 bp Feature: domain Description: GIIM Note: maturase Location: 14116-1432 9 bp Feature: gene Location: 14653-14871 bp Feature: gene Location: 15002-15814 bp Feature: domain Description: sensory_box Location: 15011-15134 bp Feature: domain Description: sensory_box Location: 15011-15134 bp Feature: domain Description: sensory_box Location: 15152-15521 bp Feature: domain Description: sensory_box Location: 15152 -1552 1 bp Feature: domain Description: sensory_box Location: 15536-15725 bp Feature: domain Description: sensory_box Location: 15536-1572 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDC_hydrolase (cd01311), RVT-GII, GIIM (pfam08388), sensory_box (TIGR00229)