myRT

myRT report for GCA_000773475.1_ASM77347v1

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Seq: JPXL01000051.1 (71831 bp)
Overview 1 RT 1: 65013-71808 bp Neighborhood of RT #1 [65013, 71825] HTH_XRE PRK09692 RVT-UG5 nitrilase Psu Feature: gene Location: 65013-65477 bp Ori: KGT17979.1 Feature: domain Description: HTH_XRE Location: 65043-65211 bp Feature: domain Description: HTH_XRE Location: 65043-6521 1 bp Feature: gene Location: 66155-67411 bp Ori: KGT17980.1 Feature: domain Description: PRK09692 Location: 66164-67367 bp Feature: domain Description: PRK09692 Location: 661 64-67367 bp Feature: gene Location: 67504-70380 bp Ori: KGT17981.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 67978-68506 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 67978-68506 bp Feature: domain Description: nitrilase Location: 69718-70300 bp Feature: domain Description: nitrilase Location: 6971 8-70300 bp Feature: gene Location: 70377-71066 bp Feature: gene Location: 71268-71825 bp Ori: KGT17983.1 Feature: domain Description: Psu Location: 71286-71808 bp Feature: domain Description: Psu Location: 71 286-71 808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), PRK09692 (Integrase; provisional), RVT-UG5, nitrilase (cl11424), Psu (pfam07455)

Seq: JPXL01000088.1 (43339 bp)
Overview 1 RT 1: 29-3616 bp Neighborhood of RT #1 [29, 3618] RVT_N RVT-GII GIIM HNHc gntK PRK14987 Feature: gene Location: 29-1696 bp Ori: KGT15642.1 Feature: domain Description: RVT_N Location: 77-314 bp Feature: domain Description: RVT_N Location: 77-314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-1007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-1007 bp Feature: domain Description: GIIM Note: maturase Location: 1058-1292 bp Feature: domain Description: GIIM Note: maturase Location: 1058-12 92 bp Feature: domain Description: HNHc Note: nucleases Location: 1502-1661 bp Feature: domain Description: HNHc Note: nucleases Location: 1502 -1661 bp Feature: gene Location: 1957-2445 bp Ori: KGT15643.1 Gene: gntK Feature: domain Description: gntK Location: 1960-2440 bp Feature: domain Description: gntK Location: 1960-2 440 bp Feature: gene Location: 2623-3618 bp Ori: KGT15644.1 Feature: domain Description: PRK14987 Location: 2626-3616 bp Feature: domain Description: PRK14987 Location: 2 62 6-3616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), gntK (PRK11545), PRK14987 (HTH-type transcriptional regulator GntR)

Seq: JPXL01000095.1 (2177 bp)
Overview 1 RT 1: 672-1935 bp Neighborhood of RT #1 [672, 2177] RVT-GII GIIM Feature: gene Location: 672-2177 bp Ori: KGT14937.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 173 7-193 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JPXL01000055.1 (29104 bp)
Overview 1 RT 1: 15393-20389 bp Neighborhood of RT #1 [15393, 20389] CoiA PRK13889 RVT-Retrons HTH_XRE Feature: gene Location: 15393-16394 bp Ori: KGT17741.1 Feature: domain Description: CoiA Location: 15474-15612 bp Feature: domain Description: CoiA Location: 154 74 -15612 bp Feature: gene Location: 17130-18632 bp Ori: KGT17742.1 Feature: domain Description: PRK13889 Location: 17133-17712 bp Feature: domain Description: PRK13889 Location: 17133-17712 bp Feature: gene Location: 18709-19809 bp Ori: KGT17743.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18850-19402 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18850-194 02 bp Feature: gene Location: 19802-20083 bp Ori: KGT17744.1 Feature: domain Description: HTH_XRE Location: 19817-19982 bp Feature: domain Description: HTH_XRE Location: 19817-19982 bp Feature: gene Location: 20174-20389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CoiA (pfam06054), PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-Retrons, HTH_XRE (smart00530)