myRT

myRT report for GCA_000774145.1_ASM77414v1

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Seq: KN322981.1 Pseudomonas mediterranea CFBP 5447 genomic scaffold scaffold30, whole genome shotgun sequence (283169 bp)
Overview 1 RT 1: 35543-44143 bp Neighborhood of RT #1 [35543, 44143] ICE_TraI_Pfluor TraI_2_C Phage_int_SAM_2 Integrase_1 RVT-UG15 SbcC SbcC Feature: gene Location: 35543-36910 bp Ori: KGU86629.1 Feature: domain Description: ICE_TraI_Pfluor Location: 35621-36263 bp Feature: domain Description: ICE_TraI_Pfluor Location: 35621 -36263 bp Feature: domain Description: TraI_2_C Location: 36491-36857 bp Feature: domain Description: TraI_2_C Location: 36491 -36857 bp Feature: gene Location: 37322-38185 bp Ori: KGU86630.1 Feature: domain Description: Phage_int_SAM_2 Location: 37325-37589 bp Feature: domain Description: Phage_int_SAM_2 Location: 37325-37589 bp Feature: domain Description: Integrase_1 Location: 37691-38021 bp Feature: domain Description: Integrase_1 Location: 37691 -38021 bp Feature: gene Location: 39366-41006 bp Ori: KGU86631.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 39807-40224 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 39807-40224 bp Feature: gene Location: 41178-43097 bp Ori: KGU86632.1 Feature: domain Description: SbcC Location: 41247-41334 bp Feature: domain Description: SbcC Location: 41 247-41 334 bp Feature: domain Description: SbcC Location: 41856-42693 bp Feature: domain Description: SbcC Location: 41 856-42693 bp Feature: gene Location: 43559-44143 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ICE_TraI_Pfluor (TIGR03760), TraI_2_C (pfam07515), Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835), RVT-UG15, SbcC (COG0419)