myRT

myRT report for GCA_000774645.1_BCW_5

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Seq: KN323043.1 Burkholderia pseudomallei MSHR4000 genomic scaffold scaffold3, whole genome shotgun sequence (134395 bp)
Overview 1 RT 1: 79676-83593 bp Neighborhood of RT #1 [79676, 83628] recomb_XerC PHA02517 RVT-GII GIIM InsE Feature: gene Location: 79676-80221 bp Ori: KGW18144.1 Feature: domain Description: recomb_XerC Location: 79970-80138 bp Feature: domain Description: recomb_XerC Location: 79970-801 38 bp Feature: gene Location: 80205-80660 bp Ori: KGW18047.1 Feature: domain Description: PHA02517 Location: 80214-80646 bp Feature: domain Description: PHA0251 7 Location: 8021 4-80646 bp Feature: gene Location: 80756-82273 bp Ori: KGW18052.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81014-81752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 01 4-81 752 bp Feature: domain Description: GIIM Note: maturase Location: 81863-82034 bp Feature: domain Description: GIIM Note: maturase Location: 81 863-82034 bp Feature: gene Location: 82852-83367 bp Feature: gene Location: 83320-83628 bp Ori: KGW18062.1 Feature: domain Description: InsE Location: 83323-83593 bp Feature: domain Description: InsE Location: 83323-83593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT recomb_XerC (TIGR02224), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: KN323041.1 Burkholderia pseudomallei MSHR4000 genomic scaffold scaffold1, whole genome shotgun sequence (4316910 bp)
Overview 1 RT 1: 2741434-2747652 bp 2 RT 2: 3733477-3739918 bp Neighborhood of RT #1 [2741434, 2747711] AAA_17 RVT-Retrons MobA_MobL Neighborhood of RT #2 [3733477, 3739918] RVT-UG9 PRK14975 Feature: gene Location: 2741434-2741958 bp Ori: KGW12191.1 Feature: domain Description: AAA_17 Location: 2741455-2741800 bp Feature: domain Description: AAA_17 Location: 2 741455-2 741800 bp Feature: gene Location: 2742041-2743567 bp Feature: gene Location: 2743591-2744958 bp Ori: KGW12056.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2743981-2744668 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 743981-2 744668 bp Feature: gene Location: 2745300-2746007 bp Feature: gene Location: 2746998-2747711 bp Ori: KGW11297.1 Feature: domain Description: MobA_MobL Location: 2747127-2747652 bp Feature: domain Description: MobA_MobL Location: 2 74712 7-2 747652 bp Feature: gene Location: 3733477-3733698 bp Feature: gene Location: 3733856-3734647 bp Feature: gene Location: 3735345-3737009 bp Ori: KGW11233.1 Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 3735573-3736212 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 3735573-37362 12 bp Feature: gene Location: 3737011-3738546 bp Ori: KGW11642.1 Feature: domain Description: PRK14975 Location: 3737131-3738430 bp Feature: domain Description: PRK14975 Location: 3737131-3738430 bp Feature: gene Location: 3739487-3739918 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_17 (pfam13207), RVT-Retrons, MobA_MobL (pfam03389), RVT-UG9, PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional)