myRT

myRT report for GCA_000774715.1_BPO

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Seq: KN323051.1 Burkholderia pseudomallei MSHR2990 genomic scaffold scaffold2, whole genome shotgun sequence (5526989 bp)
Overview 1 RT 1: 4934904-4939306 bp Neighborhood of RT #1 [4934904, 4939323] InsE HTH_21 RVT-GII GIIM PHA02517 GH-E Feature: gene Location: 4934904-4935212 bp Ori: KGW74154.1 Feature: domain Description: InsE Location: 4934907-4935177 bp Feature: domain Description: InsE Location: 4934907-49351 77 bp Feature: gene Location: 4935209-4935616 bp Ori: KGW74174.1 Feature: domain Description: HTH_21 Location: 4935311-4935461 bp Feature: domain Description: HTH_21 Location: 493531 1 -4935461 bp Feature: gene Location: 4936243-4937775 bp Ori: KGW74159.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4936516-4937254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 493651 6-4937254 bp Feature: domain Description: GIIM Note: maturase Location: 4937365-4937536 bp Feature: domain Description: GIIM Note: maturase Location: 4937365-4937536 bp Feature: gene Location: 4937871-4938326 bp Ori: KGW74173.1 Feature: domain Description: PHA02517 Location: 4937880-4938312 bp Feature: domain Description: PHA0251 7 Location: 4937880-493831 2 bp Feature: gene Location: 4938664-4939323 bp Ori: KGW74101.1 Feature: domain Description: GH-E Location: 4939114-4939306 bp Feature: domain Description: GH-E Location: 49391 1 4-4939306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), HTH_21 (pfam13276), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), GH-E (pfam14410)

Seq: KN323053.1 Burkholderia pseudomallei MSHR2990 genomic scaffold scaffold4, whole genome shotgun sequence (250536 bp)
Overview 1 RT 1: 242041-245459 bp Neighborhood of RT #1 [242041, 245512] RVT-GII GIIM DDE_Tnp_IS66 PRiA4_ORF3 Feature: gene Location: 242041-242190 bp Feature: gene Location: 242238-243056 bp Feature: gene Location: 243260-243874 bp Ori: KGW80285.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 243269-243473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 432 69-2 43473 bp Feature: domain Description: GIIM Note: maturase Location: 243551-243770 bp Feature: domain Description: GIIM Note: maturase Location: 2 43551-2 43770 bp Feature: gene Location: 244184-244744 bp Ori: KGW80286.1 Feature: domain Description: DDE_Tnp_IS66 Location: 244193-244619 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 44193-2 44619 bp Feature: gene Location: 244916-245512 bp Ori: KGW80306.1 Feature: domain Description: PRiA4_ORF3 Location: 244940-245459 bp Feature: domain Description: PRiA4_ORF3 Location: 2 44940-2 45459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), PRiA4_ORF3 (pfam07929)