myRT

myRT report for GCA_000775775.1_ac_endosymbM.elongata_FMR23-6_01

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Seq: DF850521.1 Bacterium endosymbiont of Mortierella elongata FMR23-6 DNA, scaffold: EMBE_scf_01, whole genome shotgun sequence (2763170 bp)
Overview 1 RT 1: 181326-184538 bp 2 RT 2: 524057-530939 bp 3 RT 3: 797860-802601 bp 4 RT 4: 1702894-1707317 bp 5 RT 5: 1846965-1855705 bp 6 RT 6: 2576595-2576703 bp Neighborhood of RT #1 [181326, 184621] RVT-GII GIIM COG3547 YcbL-like_MBL-fold Neighborhood of RT #2 [524057, 530962] PRK05724 tilS tilS RVT-GII GIIM entF entF Neighborhood of RT #3 [797860, 802601] RVT-GII GIIM Neighborhood of RT #4 [1702894, 1707317] RVT_N RVT-GII GIIM Neighborhood of RT #5 [1846965, 1855705] PHA02517 InsE RVT_N RVT-GII GIIM HNHc NACHT NOD2_WH HEAT HEAT_EZ HEAT HEAT HEAT_2 Neighborhood of RT #6 [2576595, 2576789] RVT-GII Feature: gene Location: 181326-182936 bp Ori: GAM51700.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 181896-182550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 896-1 82550 bp Feature: domain Description: GIIM Note: maturase Location: 182634-182841 bp Feature: domain Description: GIIM Note: maturase Location: 1 82634-1 82841 bp Feature: gene Location: 183019-183525 bp Ori: GAM51701.1 Feature: domain Description: COG3547 Location: 183037-183475 bp Feature: domain Description: COG3547 Location: 1 83037-1 83475 bp Feature: gene Location: 183962-184621 bp Ori: GAM51702.1 Feature: domain Description: YcbL-like_MBL-fold Location: 183974-184538 bp Feature: domain Description: YcbL-like_MBL-fold Location: 1 83974-1 84538 bp Feature: gene Location: 524057-525040 bp Ori: GAM52007.1 Feature: domain Description: PRK05724 Location: 524063-525011 bp Feature: domain Description: PRK05724 Location: 524063-52501 1 bp Feature: gene Location: 525021-526514 bp Ori: GAM52008.1 Feature: domain Description: tilS Location: 525096-526062 bp Feature: domain Description: tilS Location: 525096-526062 bp Feature: domain Description: tilS Location: 526332-526419 bp Feature: domain Description: tilS Location: 526332-52641 9 bp Feature: gene Location: 527996-529312 bp Ori: GAM52009.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 528299-528926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 528299-528926 bp Feature: domain Description: GIIM Note: maturase Location: 529001-529217 bp Feature: domain Description: GIIM Note: maturase Location: 529001 -52921 7 bp Feature: gene Location: 529782-530351 bp Ori: GAM52010.1 Feature: domain Description: entF Location: 529788-530265 bp Feature: domain Description: entF Location: 529788-530265 bp Feature: gene Location: 530348-530962 bp Ori: GAM52011.1 Feature: domain Description: entF Location: 530357-530939 bp Feature: domain Description: entF Location: 530357-530939 bp Feature: gene Location: 797860-798006 bp Feature: gene Location: 798094-798249 bp Feature: gene Location: 798410-799819 bp Ori: GAM52223.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 798764-799421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 798764-799421 bp Feature: domain Description: GIIM Note: maturase Location: 799502-799730 bp Feature: domain Description: GIIM Note: maturase Location: 799502-799730 bp Feature: gene Location: 800335-800985 bp Feature: gene Location: 802476-802601 bp Feature: gene Location: 1702894-1703667 bp Feature: gene Location: 1703899-1704030 bp Feature: gene Location: 1705112-1706752 bp Ori: GAM53012.1 Feature: domain Description: RVT_N Location: 1705328-1705565 bp Feature: domain Description: RVT_N Location: 1 705328-1 705565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1705616-1706258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 70561 6-1 706258 bp Feature: domain Description: GIIM Note: maturase Location: 1706309-1706543 bp Feature: domain Description: GIIM Note: maturase Location: 1 706309-1 706543 bp Feature: gene Location: 1707057-1707317 bp Feature: gene Location: 1846965-1847840 bp Ori: GAM53127.1 Feature: domain Description: PHA02517 Location: 1847031-1847826 bp Feature: domain Description: PHA0251 7 Location: 1 847031 -1 847826 bp Feature: gene Location: 1847837-1848169 bp Ori: GAM53128.1 Feature: domain Description: InsE Location: 1847864-1848167 bp Feature: domain Description: InsE Location: 1 847864-1 8481 67 bp Feature: gene Location: 1848659-1850380 bp Ori: GAM53129.1 Feature: domain Description: RVT_N Location: 1848719-1848962 bp Feature: domain Description: RVT_N Location: 1 84871 9-1 848962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1849007-1849655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 849007-1 849655 bp Feature: domain Description: GIIM Note: maturase Location: 1849709-1849940 bp Feature: domain Description: GIIM Note: maturase Location: 1 849709-1 849940 bp Feature: domain Description: HNHc Note: nucleases Location: 1850168-1850324 bp Feature: domain Description: HNHc Note: nucleases Location: 1 8501 68-1 850324 bp Feature: gene Location: 1850778-1855475 bp Ori: GAM53130.1 Feature: domain Description: NACHT Location: 1851687-1852146 bp Feature: domain Description: NACHT Location: 1 851 687-1 8521 46 bp Feature: domain Description: NOD2_WH Location: 1852437-1852524 bp Feature: domain Description: NOD2_WH Location: 1 852437-1 852524 bp Feature: domain Description: HEAT Location: 1853211-1853556 bp Feature: domain Description: HEAT Location: 1 85321 1 -1 853556 bp Feature: domain Description: HEAT_EZ Location: 1853661-1853763 bp Feature: domain Description: HEAT_EZ Location: 1 853661 -1 853763 bp Feature: domain Description: HEAT Location: 1853799-1854276 bp Feature: domain Description: HEAT Location: 1 853799-1 854276 bp Feature: domain Description: HEAT Location: 1854303-1854777 bp Feature: domain Description: HEAT Location: 1 854303-1 854777 bp Feature: domain Description: HEAT_2 Location: 1854963-1855191 bp Feature: domain Description: HEAT_2 Location: 1 854963-1 8551 91 bp Feature: gene Location: 1855571-1855705 bp Feature: gene Location: 2576595-2576789 bp Ori: GAM53767.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2576604-2576703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2576604-2576703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), YcbL-like_MBL-fold (cd07737), PRK05724 (acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated), tilS (PRK10660), entF (PRK10252), RVT_N (pfam13655), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)
HNHc (smart00507), NACHT (pfam05729), NOD2_WH (pfam17779), HEAT (sd00044), HEAT_EZ (pfam13513), HEAT_2 (pfam13646)