myRT

myRT report for GCA_000775915.1_ASM77591v1

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Seq: BBLT01000002.1 Sporocytophaga myxococcoides DNA, contig: Contig48_02, strain: PG-01, whole genome shotgun sequence (821468 bp)
Overview 1 RT 1: 736249-745897 bp Neighborhood of RT #1 [736249, 746322] WYL PhyH RtcB RtcB RVT-Retrons WGR_DNA_ligase HEAT HEAT DNA_alkylation Feature: gene Location: 736249-737835 bp Ori: GAL84343.1 Feature: domain Description: WYL Location: 736552-737077 bp Feature: domain Description: WYL Location: 736552-737077 bp Feature: domain Description: PhyH Location: 737146-737752 bp Feature: domain Description: PhyH Location: 7371 46-737752 bp Feature: gene Location: 738318-739742 bp Ori: GAL84344.1 Feature: domain Description: RtcB Location: 738636-738873 bp Feature: domain Description: RtcB Location: 738636-738873 bp Feature: domain Description: RtcB Location: 738942-739701 bp Feature: domain Description: RtcB Location: 738942-739701 bp Feature: gene Location: 739830-741341 bp Ori: GAL84345.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 740385-741003 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 740385-741 003 bp Feature: gene Location: 741616-743259 bp Feature: gene Location: 743263-746322 bp Ori: GAL84347.1 Feature: domain Description: WGR_DNA_ligase Location: 743278-743494 bp Feature: domain Description: WGR_DNA_ligase Location: 743278-743494 bp Feature: domain Description: HEAT Location: 743542-743872 bp Feature: domain Description: HEAT Location: 743542-743872 bp Feature: domain Description: HEAT Location: 745138-745456 bp Feature: domain Description: HEAT Location: 7451 38-745456 bp Feature: domain Description: DNA_alkylation Location: 745675-745897 bp Feature: domain Description: DNA_alkylation Location: 745675-745897 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WYL (pfam13280), PhyH (pfam05721), RtcB (pfam01139), RVT-Retrons, WGR_DNA_ligase (cd07998), HEAT (sd00044), DNA_alkylation (pfam08713)

Seq: BBLT01000006.1 Sporocytophaga myxococcoides DNA, contig: Contig48_06, strain: PG-01, whole genome shotgun sequence (489627 bp)
Overview 1 RT 1: 300854-308441 bp Neighborhood of RT #1 [300854, 308441] RVT-UG5 NACHT Pentapeptide Pentapeptide Feature: gene Location: 300854-301012 bp Feature: gene Location: 300991-301170 bp Feature: gene Location: 301602-304745 bp Ori: GAL86026.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 302079-302559 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 302 079-302 559 bp Feature: gene Location: 304979-307699 bp Ori: GAL86027.1 Feature: domain Description: NACHT Location: 305816-306272 bp Feature: domain Description: NACHT Location: 305816-3062 72 bp Feature: domain Description: Pentapeptide Location: 307271-307352 bp Feature: domain Description: Pentapeptide Location: 3072 71-307352 bp Feature: domain Description: Pentapeptide Location: 307391-307472 bp Feature: domain Description: Pentapeptide Location: 307391-307472 bp Feature: gene Location: 307974-308441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, NACHT (pfam05729), Pentapeptide (pfam00805)