myRT

myRT report for GCA_000776035.1_ASM77603v1

Download annotations/find similar RTs

Seq: JSGJ01000012.1 (17947 bp)
Overview 1 RT 1: 13046-16935 bp Neighborhood of RT #1 [13046, 16964] PHA02517 RVT-GII GIIM InsE TnpB_IS66 Feature: gene Location: 13046-13207 bp Feature: gene Location: 13255-13536 bp Feature: domain Description: PHA02517 Location: 13261-13471 bp Feature: domain Description: PHA0251 7 Location: 1 3261 -1 3471 bp Feature: gene Location: 14128-15651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14401-15133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4401 -1 51 33 bp Feature: domain Description: GIIM Note: maturase Location: 15208-15406 bp Feature: domain Description: GIIM Note: maturase Location: 1 5208-1 5406 bp Feature: gene Location: 16216-16620 bp Feature: domain Description: InsE Location: 16246-16582 bp Feature: domain Description: InsE Location: 1 6246-1 6582 bp Feature: gene Location: 16671-16964 bp Feature: domain Description: TnpB_IS66 Location: 16674-16935 bp Feature: domain Description: TnpB_IS66 Location: 1 6674-1 6935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), TnpB_IS66 (pfam05717)

Seq: JSGJ01000093.1 (101595 bp)
Overview 1 RT 1: 3-2836 bp Neighborhood of RT #1 [3, 2836] RVT-AbiP2 HTH_29 HTH_33 DDE_3 Feature: gene Location: 3-1373 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 264-720 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 64-72 0 bp Feature: gene Location: 1475-2512 bp Feature: domain Description: HTH_29 Location: 1571-1742 bp Feature: domain Description: HTH_2 9 Location: 1571-1742 bp Feature: domain Description: HTH_33 Location: 1775-1937 bp Feature: domain Description: HTH_33 Location: 1775-1937 bp Feature: domain Description: DDE_3 Location: 1979-2408 bp Feature: domain Description: DDE_3 Location: 1979-2 408 bp Feature: gene Location: 2546-2836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358)

Seq: JSGJ01000066.1 (12680 bp)
Overview 1 RT 1: 1-3770 bp Neighborhood of RT #1 [1, 3770] DDE_Tnp_IS66 RVT-GII GIIM rve_3 Feature: gene Location: 1-900 bp Feature: domain Description: DDE_Tnp_IS66 Location: 22-859 bp Feature: domain Description: DDE_Tnp_IS66 Location: 22-859 bp Feature: gene Location: 1362-2594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1563-2217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1563 -2217 bp Feature: domain Description: GIIM Note: maturase Location: 2295-2517 bp Feature: domain Description: GIIM Note: maturase Location: 2295-2517 bp Feature: gene Location: 2932-3390 bp Feature: domain Description: rve_3 Location: 3118-3307 bp Feature: domain Description: rve_3 Location: 3 118-3 3 07 bp Feature: gene Location: 3594-3770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), rve_3 (pfam13683)