myRT

myRT report for GCA_000776255.1_ASM77625v1

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Seq: JSFQ01000136.1 (233762 bp)
Overview 1 RT 1: 229946-233317 bp Neighborhood of RT #1 [229946, 233382] DUF1016_N PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 229946-230185 bp Feature: domain Description: DUF1016_N Location: 230003-230180 bp Feature: domain Description: DUF1 01 6_N Location: 230003-2301 80 bp Feature: gene Location: 230225-230671 bp Feature: domain Description: PHA02517 Location: 230228-230669 bp Feature: domain Description: PHA0251 7 Location: 230228-230669 bp Feature: gene Location: 230788-232311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231061-231793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 061 -231 793 bp Feature: domain Description: GIIM Note: maturase Location: 231868-232066 bp Feature: domain Description: GIIM Note: maturase Location: 231 868-232066 bp Feature: gene Location: 232265-232690 bp Feature: gene Location: 232903-233382 bp Feature: domain Description: PHA02517 Location: 232963-233317 bp Feature: domain Description: PHA0251 7 Location: 232963-23331 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1016_N (pfam17761), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JSFQ01000125.1 (77604 bp)
Overview 1 RT 1: 4478-10930 bp Neighborhood of RT #1 [4478, 10930] Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 4478-4729 bp Feature: gene Location: 4759-5595 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 5248-5419 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 52 48-5419 bp Feature: gene Location: 6251-7351 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6434-6962 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6434-6962 bp Feature: gene Location: 7466-9742 bp Feature: domain Description: AAA_15 Location: 7499-8507 bp Feature: domain Description: AAA_15 Location: 7499-8507 bp Feature: gene Location: 10625-10930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)